Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GAPDHP71-201ENST00000511530 1003 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN20P56880 SNORD46.2-201ENST00000516021 102 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN20P56880 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN20P56880 AC091078.2-201ENST00000557145 559 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN20P56880 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CLDN20P56880 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN20P56880 AC010487.1-201ENST00000594408 1172 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 KATNBL1P5-201ENST00000605015 517 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AL450270.1-201ENST00000606160 391 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN20P56880 AP000240.1-201ENST00000609910 452 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AC015922.4-201ENST00000612568 690 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AC015712.7-201ENST00000615211 635 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AL445670.1-201ENST00000618889 801 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AC241377.1-201ENST00000619797 406 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
CLDN20P56880 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN20P56880 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
CLDN20P56880 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN20P56880 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CLDN20P56880 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 AC130304.1-201ENST00000622942 2385 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN20P56880 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 AL592494.2-201ENST00000425455 1548 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 AC112255.1-201ENST00000624070 2493 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 AC012078.1-201ENST00000405035 1646 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 AC125336.1-201ENST00000508893 2827 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 RN7SKP185-201ENST00000362813 326 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN20P56880 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLDN20P56880 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLDN20P56880 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 CDY17P-201ENST00000414121 1282 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC013410.2-201ENST00000422627 201 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 ZNF965P-201ENST00000432501 817 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AL606490.7-201ENST00000433136 191 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 AC023141.8-201ENST00000442554 208 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC007000.2-201ENST00000442564 487 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 RSU1P1-201ENST00000453416 441 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC099521.1-201ENST00000482557 334 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 MIR2117-201ENST00000516780 80 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC022826.1-201ENST00000519383 805 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.27□□□□□ -1.57
CLDN20P56880 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 AL359219.2-201ENST00000555184 348 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 HMGN2P47-201ENST00000559378 272 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.27□□□□□ -1.57
CLDN20P56880 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 MIR4660-201ENST00000583549 74 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC008521.2-201ENST00000591021 259 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 DNAJC19P3-201ENST00000594491 331 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 AL592494.3-201ENST00000609485 464 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC007786.3-201ENST00000615154 596 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 AP006248.3-201ENST00000623580 594 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 AC138965.3-201ENST00000623875 498 ntBASIC5.27□□□□□ -1.57
CLDN20P56880 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN20P56880 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.27□□□□□ -1.57
CLDN20P56880 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
CLDN20P56880 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms