Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.05□□□□□ -1.44
VCPP55072 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.05□□□□□ -1.44
VCPP55072 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 AC020633.1-201ENST00000468439 2247 ntBASIC6.05□□□□□ -1.44
VCPP55072 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VCPP55072 AP001284.1-201ENST00000528393 2118 ntBASIC6.04□□□□□ -1.44
VCPP55072 YES1P1-201ENST00000418510 1628 ntBASIC6.04□□□□□ -1.44
VCPP55072 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.04□□□□□ -1.44
VCPP55072 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
VCPP55072 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VCPP55072 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VCPP55072 MIR765-201ENST00000390226 114 ntBASIC6.04□□□□□ -1.44
VCPP55072 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VCPP55072 RNA5SP91-201ENST00000390902 119 ntBASIC6.04□□□□□ -1.44
VCPP55072 AL589647.1-201ENST00000402485 466 ntBASIC6.04□□□□□ -1.44
VCPP55072 AC016397.1-201ENST00000412463 242 ntBASIC6.04□□□□□ -1.44
VCPP55072 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.04□□□□□ -1.44
VCPP55072 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.04□□□□□ -1.44
VCPP55072 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VCPP55072 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.04□□□□□ -1.44
VCPP55072 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.04□□□□□ -1.44
VCPP55072 AC015983.1-201ENST00000441577 373 ntBASIC6.04□□□□□ -1.44
VCPP55072 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.04□□□□□ -1.44
VCPP55072 RPL7P39-201ENST00000481157 744 ntBASIC6.04□□□□□ -1.44
VCPP55072 OR7E157P-201ENST00000494376 911 ntBASIC6.04□□□□□ -1.44
VCPP55072 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.04□□□□□ -1.44
VCPP55072 HMGB1P42-201ENST00000532126 553 ntBASIC6.04□□□□□ -1.44
VCPP55072 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.04□□□□□ -1.44
VCPP55072 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.04□□□□□ -1.44
VCPP55072 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.04□□□□□ -1.44
VCPP55072 AC087763.1-201ENST00000603391 286 ntBASIC6.04□□□□□ -1.44
VCPP55072 MIR378J-201ENST00000611988 109 ntBASIC6.04□□□□□ -1.44
VCPP55072 AC010809.3-201ENST00000621310 641 ntBASIC6.04□□□□□ -1.44
VCPP55072 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VCPP55072 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VCPP55072 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VCPP55072 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
VCPP55072 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
VCPP55072 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VCPP55072 MFSD8-219ENST00000641228 2559 ntBASIC6.04□□□□□ -1.44
VCPP55072 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.04□□□□□ -1.44
VCPP55072 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 RPL26P29-201ENST00000415623 438 ntBASIC6.03□□□□□ -1.44
VCPP55072 RPL7L1P9-201ENST00000431298 745 ntBASIC6.03□□□□□ -1.44
VCPP55072 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 AC023141.8-201ENST00000442554 208 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC005297.1-201ENST00000444765 862 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC073072.2-201ENST00000447425 348 ntBASIC6.03□□□□□ -1.44
VCPP55072 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 AC006463.2-201ENST00000473326 348 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC022215.1-201ENST00000481770 362 ntBASIC6.03□□□□□ -1.44
VCPP55072 RN7SL97P-201ENST00000486780 299 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC007686.1-201ENST00000488511 463 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC112184.1-201ENST00000505179 312 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.03□□□□□ -1.44
VCPP55072 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.03□□□□□ -1.44
VCPP55072 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.03□□□□□ -1.44
VCPP55072 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.03□□□□□ -1.44
VCPP55072 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 AC145423.1-201ENST00000605712 336 ntBASIC6.03□□□□□ -1.44
VCPP55072 uc_338.18-201ENST00000615451 175 ntBASIC6.03□□□□□ -1.44
VCPP55072 RNA5SP439-201ENST00000617595 124 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC022919.1-201ENST00000624979 626 ntBASIC6.03□□□□□ -1.44
VCPP55072 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.03□□□□□ -1.44
VCPP55072 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VCPP55072 AC011933.2-201ENST00000578539 2790 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC109446.4-201ENST00000623235 2755 ntBASIC6.03□□□□□ -1.44
VCPP55072 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VCPP55072 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 AC009962.1-201ENST00000567327 3813 ntBASIC6.03□□□□□ -1.44
VCPP55072 AC114774.1-201ENST00000507410 1770 ntBASIC6.03□□□□□ -1.44
VCPP55072 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
VCPP55072 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.02□□□□□ -1.44
VCPP55072 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
VCPP55072 AC092451.3-201ENST00000625067 1343 ntBASIC6.02□□□□□ -1.45
VCPP55072 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.02□□□□□ -1.45
VCPP55072 AC016745.2-201ENST00000608834 3443 ntBASIC6.02□□□□□ -1.45
VCPP55072 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.02□□□□□ -1.45
VCPP55072 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VCPP55072 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VCPP55072 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VCPP55072 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VCPP55072 AL357752.1-201ENST00000412817 349 ntBASIC6.02□□□□□ -1.45
VCPP55072 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms