Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.77□□□□□ -1.49
LIMK1P53667 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC018552.1-201ENST00000562099 811 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 MIR4646-201ENST00000580775 63 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 MIR4260-201ENST00000583107 67 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.77□□□□□ -1.49
LIMK1P53667 ELOCP28-201ENST00000590044 317 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 BNIP3P7-201ENST00000605641 516 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 AL137067.2-201ENST00000621202 131 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC140134.1-201ENST00000511830 3544 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LIMK1P53667 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.77□□□□□ -1.49
LIMK1P53667 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 AC133552.1-201ENST00000569988 4007 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.76□□□□□ -1.49
LIMK1P53667 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LIMK1P53667 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.76□□□□□ -1.49
LIMK1P53667 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIMK1P53667 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIMK1P53667 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LIMK1P53667 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.76□□□□□ -1.49
LIMK1P53667 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 METTL15P3-201ENST00000415522 1221 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 OR51A6P-201ENST00000418680 1004 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 MRPS21P2-201ENST00000424704 264 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 AL365220.1-201ENST00000432923 399 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 MAPRE1P3-201ENST00000435438 796 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 RPL12P18-201ENST00000437175 325 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.76□□□□□ -1.49
LIMK1P53667 OR11I1P-201ENST00000486033 954 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 AC093890.1-201ENST00000502554 540 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 AC008629.2-201ENST00000503783 483 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.76□□□□□ -1.49
LIMK1P53667 AC022832.1-201ENST00000530718 645 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LIMK1P53667 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.76□□□□□ -1.49
LIMK1P53667 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.76□□□□□ -1.49
LIMK1P53667 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.76□□□□□ -1.49
LIMK1P53667 MIR3189-201ENST00000578735 73 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.76□□□□□ -1.49
LIMK1P53667 AP001267.4-201ENST00000602598 545 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 AL139099.4-201ENST00000614802 114 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 AC022919.1-201ENST00000624979 626 ntBASIC5.76□□□□□ -1.49
LIMK1P53667 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LIMK1P53667 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIMK1P53667 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LIMK1P53667 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.76□□□□□ -1.49
LIMK1P53667 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIMK1P53667 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIMK1P53667 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LIMK1P53667 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.76□□□□□ -1.49
LIMK1P53667 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.76□□□□□ -1.49
LIMK1P53667 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIMK1P53667 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIMK1P53667 AC003985.2-201ENST00000562268 1669 ntBASIC5.75□□□□□ -1.49
LIMK1P53667 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIMK1P53667 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LIMK1P53667 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.75□□□□□ -1.49
LIMK1P53667 NLRP3P1-201ENST00000622303 1785 ntBASIC5.75□□□□□ -1.49
LIMK1P53667 RBPJP2-201ENST00000618187 1444 ntBASIC5.75□□□□□ -1.49
LIMK1P53667 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIMK1P53667 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
LIMK1P53667 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIMK1P53667 AL359091.1-201ENST00000449048 1734 ntBASIC5.75□□□□□ -1.49
LIMK1P53667 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LIMK1P53667 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LIMK1P53667 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.75□□□□□ -1.49
LIMK1P53667 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.75□□□□□ -1.49
LIMK1P53667 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LIMK1P53667 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.75□□□□□ -1.49
LIMK1P53667 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.75□□□□□ -1.49
LIMK1P53667 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.75□□□□□ -1.49
LIMK1P53667 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.75□□□□□ -1.49
LIMK1P53667 AC079922.1-201ENST00000443291 359 ntBASIC5.75□□□□□ -1.49
LIMK1P53667 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.75□□□□□ -1.49
LIMK1P53667 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.75□□□□□ -1.49
LIMK1P53667 FRG2FP-204ENST00000453982 852 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms