Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.47□□□□□ -1.53
PDX1P52945 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PDX1P52945 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.47□□□□□ -1.53
PDX1P52945 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.47□□□□□ -1.53
PDX1P52945 CUL4AP1-201ENST00000514750 1863 ntBASIC5.47□□□□□ -1.53
PDX1P52945 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.47□□□□□ -1.53
PDX1P52945 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
PDX1P52945 AL137058.3-201ENST00000624531 3099 ntBASIC5.46□□□□□ -1.53
PDX1P52945 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.46□□□□□ -1.53
PDX1P52945 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PDX1P52945 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PDX1P52945 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 AL161912.4-201ENST00000623889 2468 ntBASIC5.46□□□□□ -1.54
PDX1P52945 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDX1P52945 RNA5SP319-201ENST00000362768 119 ntBASIC5.46□□□□□ -1.54
PDX1P52945 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDX1P52945 GAPDHP42-201ENST00000406848 981 ntBASIC5.46□□□□□ -1.54
PDX1P52945 USP9YP19-201ENST00000412165 485 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AC019205.1-201ENST00000421830 730 ntBASIC5.46□□□□□ -1.54
PDX1P52945 RCC2P2-201ENST00000422174 918 ntBASIC5.46□□□□□ -1.54
PDX1P52945 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDX1P52945 KRT8P51-201ENST00000438938 274 ntBASIC5.46□□□□□ -1.54
PDX1P52945 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.46□□□□□ -1.54
PDX1P52945 SUMO2P1-206ENST00000445436 284 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AC017099.1-201ENST00000448261 1028 ntBASIC5.46□□□□□ -1.54
PDX1P52945 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 VDAC2P4-201ENST00000452925 711 ntBASIC5.46□□□□□ -1.54
PDX1P52945 RSU1P1-201ENST00000453416 441 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.46□□□□□ -1.54
PDX1P52945 C1DP3-201ENST00000455013 423 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.46□□□□□ -1.54
PDX1P52945 AC090638.1-201ENST00000498296 909 ntBASIC5.46□□□□□ -1.54
PDX1P52945 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 ATG10-AS1-201ENST00000504846 648 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.46□□□□□ -1.54
PDX1P52945 AC093815.1-201ENST00000508637 280 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.46□□□□□ -1.54
PDX1P52945 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.46□□□□□ -1.54
PDX1P52945 HNRNPCP1-201ENST00000556181 766 ntBASIC5.46□□□□□ -1.54
PDX1P52945 DPPA3P2-202ENST00000557188 1219 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AC093524.1-201ENST00000564266 1094 ntBASIC5.46□□□□□ -1.54
PDX1P52945 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.46□□□□□ -1.54
PDX1P52945 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.46□□□□□ -1.54
PDX1P52945 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.46□□□□□ -1.54
PDX1P52945 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.46□□□□□ -1.54
PDX1P52945 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.46□□□□□ -1.54
PDX1P52945 AC006115.2-201ENST00000596823 202 ntBASIC5.46□□□□□ -1.54
PDX1P52945 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 AC007620.3-201ENST00000608131 497 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AL162574.2-201ENST00000614618 657 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AC037198.3-201ENST00000616754 526 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.46□□□□□ -1.54
PDX1P52945 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PDX1P52945 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 AC006600.2-201ENST00000624834 2506 ntBASIC5.46□□□□□ -1.54
PDX1P52945 AC073429.2-201ENST00000569694 1444 ntBASIC5.46□□□□□ -1.54
PDX1P52945 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PDX1P52945 NCOA4P2-201ENST00000340589 1813 ntBASIC5.46□□□□□ -1.54
PDX1P52945 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PDX1P52945 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDX1P52945 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
PDX1P52945 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
PDX1P52945 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
PDX1P52945 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.45□□□□□ -1.54
PDX1P52945 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PDX1P52945 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.45□□□□□ -1.54
PDX1P52945 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.45□□□□□ -1.54
PDX1P52945 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 AC087516.1-201ENST00000561236 2428 ntBASIC5.45□□□□□ -1.54
PDX1P52945 AC083837.1-201ENST00000565297 2994 ntBASIC5.45□□□□□ -1.54
PDX1P52945 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PDX1P52945 MRRFP1-201ENST00000435941 1675 ntBASIC5.45□□□□□ -1.54
PDX1P52945 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PDX1P52945 RNU6-386P-201ENST00000362650 107 ntBASIC5.45□□□□□ -1.54
PDX1P52945 RNU6-670P-201ENST00000364312 104 ntBASIC5.45□□□□□ -1.54
PDX1P52945 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.45□□□□□ -1.54
PDX1P52945 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.45□□□□□ -1.54
PDX1P52945 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.45□□□□□ -1.54
PDX1P52945 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.45□□□□□ -1.54
PDX1P52945 AK3P5-201ENST00000432033 519 ntBASIC5.45□□□□□ -1.54
PDX1P52945 NDUFA5P1-201ENST00000433858 341 ntBASIC5.45□□□□□ -1.54
PDX1P52945 AL500527.1-201ENST00000448532 255 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms