Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPS11P7-201ENST00000442125 465 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AL163193.1-201ENST00000444895 788 ntBASIC5.8□□□□□ -1.48
LHX1P48742 RPS4XP14-201ENST00000493072 781 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.8□□□□□ -1.48
LHX1P48742 AC024558.1-201ENST00000505008 528 ntBASIC5.8□□□□□ -1.48
LHX1P48742 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.8□□□□□ -1.48
LHX1P48742 SNORA48.9-201ENST00000516419 162 ntBASIC5.8□□□□□ -1.48
LHX1P48742 IGKV2-19-201ENST00000518132 283 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.8□□□□□ -1.48
LHX1P48742 HMGB1P40-201ENST00000525121 540 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.8□□□□□ -1.48
LHX1P48742 MTND2P17-201ENST00000550281 688 ntBASIC5.8□□□□□ -1.48
LHX1P48742 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LHX1P48742 AC093524.1-201ENST00000564266 1094 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AC010547.7-201ENST00000570323 333 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AC005341.1-201ENST00000571086 708 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AP001357.1-201ENST00000586304 1053 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.8□□□□□ -1.48
LHX1P48742 AL512329.2-201ENST00000607350 548 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AC008115.4-201ENST00000619780 775 ntBASIC5.8□□□□□ -1.48
LHX1P48742 AC021766.1-201ENST00000624404 741 ntBASIC5.8□□□□□ -1.48
LHX1P48742 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.8□□□□□ -1.48
LHX1P48742 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.8□□□□□ -1.48
LHX1P48742 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 AC083837.1-201ENST00000565297 2994 ntBASIC5.8□□□□□ -1.48
LHX1P48742 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 AL138820.1-201ENST00000617901 5305 ntBASIC5.8□□□□□ -1.48
LHX1P48742 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX1P48742 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.8□□□□□ -1.48
LHX1P48742 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.79□□□□□ -1.48
LHX1P48742 AC083899.1-201ENST00000454465 3819 ntBASIC5.79□□□□□ -1.48
LHX1P48742 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LHX1P48742 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX1P48742 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX1P48742 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LHX1P48742 AL592429.1-201ENST00000403909 1473 ntBASIC5.79□□□□□ -1.48
LHX1P48742 AC123769.1-201ENST00000530992 3192 ntBASIC5.79□□□□□ -1.48
LHX1P48742 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX1P48742 AL133388.1-201ENST00000404509 287 ntBASIC5.79□□□□□ -1.48
LHX1P48742 Z68694.1-201ENST00000413929 841 ntBASIC5.79□□□□□ -1.48
LHX1P48742 AC021876.1-201ENST00000425959 359 ntBASIC5.79□□□□□ -1.48
LHX1P48742 GAPDHP25-201ENST00000447061 1001 ntBASIC5.79□□□□□ -1.48
LHX1P48742 REG1CP-206ENST00000447469 496 ntBASIC5.79□□□□□ -1.48
LHX1P48742 RPS23P9-201ENST00000448848 438 ntBASIC5.79□□□□□ -1.48
LHX1P48742 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.79□□□□□ -1.48
LHX1P48742 AC026348.1-201ENST00000462549 1053 ntBASIC5.79□□□□□ -1.48
LHX1P48742 RPS21P4-201ENST00000487122 248 ntBASIC5.79□□□□□ -1.48
LHX1P48742 RN7SL30P-201ENST00000488416 306 ntBASIC5.79□□□□□ -1.48
LHX1P48742 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.79□□□□□ -1.48
LHX1P48742 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.79□□□□□ -1.48
LHX1P48742 RPEP1-201ENST00000504507 658 ntBASIC5.79□□□□□ -1.48
LHX1P48742 AC109464.1-201ENST00000511091 819 ntBASIC5.79□□□□□ -1.48
LHX1P48742 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.79□□□□□ -1.48
LHX1P48742 IGLV2-28-201ENST00000520681 304 ntBASIC5.79□□□□□ -1.48
LHX1P48742 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LHX1P48742 AL049874.4-201ENST00000557593 255 ntBASIC5.79□□□□□ -1.48
LHX1P48742 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LHX1P48742 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.79□□□□□ -1.48
LHX1P48742 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LHX1P48742 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LHX1P48742 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.79□□□□□ -1.48
LHX1P48742 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.79□□□□□ -1.48
LHX1P48742 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.79□□□□□ -1.48
LHX1P48742 AC093388.1-201ENST00000609166 430 ntBASIC5.79□□□□□ -1.48
LHX1P48742 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.79□□□□□ -1.48
LHX1P48742 AL031658.2-201ENST00000616850 651 ntBASIC5.79□□□□□ -1.48
LHX1P48742 AL157762.1-201ENST00000619612 415 ntBASIC5.79□□□□□ -1.48
LHX1P48742 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.79□□□□□ -1.48
LHX1P48742 uc_338.7-201ENST00000621834 124 ntBASIC5.79□□□□□ -1.48
LHX1P48742 AC073869.8-201ENST00000641806 335 ntBASIC5.79□□□□□ -1.48
LHX1P48742 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LHX1P48742 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.79□□□□□ -1.48
LHX1P48742 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LHX1P48742 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
LHX1P48742 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
LHX1P48742 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.79□□□□□ -1.48
LHX1P48742 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
LHX1P48742 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 AL929601.4-201ENST00000613011 1341 ntBASIC5.78□□□□□ -1.48
LHX1P48742 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 AC004076.2-201ENST00000620532 3323 ntBASIC5.78□□□□□ -1.48
LHX1P48742 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LHX1P48742 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 AC005294.1-201ENST00000355509 281 ntBASIC5.78□□□□□ -1.48
LHX1P48742 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 RNA5SP339-201ENST00000390987 122 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms