Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 AL121886.1-201ENST00000358609 435 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 RNA5SP305-201ENST00000362665 119 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 U3.36-201ENST00000408418 213 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 HMGB1P32-201ENST00000425971 565 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 FAM96AP1-201ENST00000430879 482 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 TMEM183AP1-205ENST00000432739 290 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 GAPDHP25-201ENST00000447061 1001 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 AC083899.1-201ENST00000454465 3819 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 HMGN1P8-201ENST00000463578 288 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC8P31273 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 RFPL4AP3-201ENST00000515267 345 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 AP002505.2-201ENST00000623585 696 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC8P31273 DNM1P47-203ENST00000571780 12667 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC8P31273 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
HOXC8P31273 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC8P31273 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HOXC8P31273 AC068769.1-201ENST00000474767 2426 ntBASIC6.03□□□□□ -1.44
HOXC8P31273 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 AP000547.3-204ENST00000588548 2523 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC8P31273 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC8P31273 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 RNU1-149P-201ENST00000390870 161 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 OR4K12P-201ENST00000406538 961 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC8P31273 RPL12P17-201ENST00000432393 498 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 UBE2V2P3-201ENST00000433562 437 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 AL590399.4-201ENST00000436561 601 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 AL157385.1-201ENST00000446973 268 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 RNA5SP373-201ENST00000517271 95 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC8P31273 AC127381.1-201ENST00000555979 939 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC8P31273 AC106730.2-201ENST00000566641 540 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 AC095055.1-201ENST00000603472 1113 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 AC116651.1-201ENST00000609724 556 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC8P31273 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC8P31273 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC8P31273 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
HOXC8P31273 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.02□□□□□ -1.45
HOXC8P31273 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HOXC8P31273 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC8P31273 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC8P31273 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC8P31273 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC8P31273 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC8P31273 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC8P31273 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HOXC8P31273 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC8P31273 AL158152.1-201ENST00000602652 1435 ntBASIC6.01□□□□□ -1.45
HOXC8P31273 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HOXC8P31273 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HOXC8P31273 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC8P31273 RNU1-43P-201ENST00000365052 165 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms