Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RPL21P110-201ENST00000433345 446 ntBASIC5.8□□□□□ -1.48
CD40P25942 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.8□□□□□ -1.48
CD40P25942 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 AC245291.3-201ENST00000443400 292 ntBASIC5.8□□□□□ -1.48
CD40P25942 AL360221.1-201ENST00000445989 335 ntBASIC5.8□□□□□ -1.48
CD40P25942 MTCO2P25-201ENST00000447065 681 ntBASIC5.8□□□□□ -1.48
CD40P25942 AC002486.2-201ENST00000447806 590 ntBASIC5.8□□□□□ -1.48
CD40P25942 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 RPS7P10-201ENST00000464254 603 ntBASIC5.8□□□□□ -1.48
CD40P25942 AL035404.1-201ENST00000497982 568 ntBASIC5.8□□□□□ -1.48
CD40P25942 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 AC098799.3-201ENST00000506095 438 ntBASIC5.8□□□□□ -1.48
CD40P25942 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 MTND4P2-201ENST00000507767 1203 ntBASIC5.8□□□□□ -1.48
CD40P25942 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 OR52H2P-201ENST00000514607 902 ntBASIC5.8□□□□□ -1.48
CD40P25942 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 RPL12P22-201ENST00000519073 490 ntBASIC5.8□□□□□ -1.48
CD40P25942 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.8□□□□□ -1.48
CD40P25942 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 AC005832.3-201ENST00000537929 631 ntBASIC5.8□□□□□ -1.48
CD40P25942 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.8□□□□□ -1.48
CD40P25942 AC004825.1-201ENST00000555068 586 ntBASIC5.8□□□□□ -1.48
CD40P25942 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 AP001981.2-201ENST00000603241 418 ntBASIC5.8□□□□□ -1.48
CD40P25942 AC073114.1-201ENST00000612027 490 ntBASIC5.8□□□□□ -1.48
CD40P25942 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.8□□□□□ -1.48
CD40P25942 AC034229.6-201ENST00000623704 224 ntBASIC5.8□□□□□ -1.48
CD40P25942 AP003072.4-201ENST00000624580 310 ntBASIC5.8□□□□□ -1.48
CD40P25942 AL034408.1-201ENST00000637712 664 ntBASIC5.8□□□□□ -1.48
CD40P25942 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
CD40P25942 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.8□□□□□ -1.48
CD40P25942 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 RACGAP1P-201ENST00000550663 1879 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC5.79□□□□□ -1.48
CD40P25942 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.79□□□□□ -1.48
CD40P25942 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 AC109315.1-201ENST00000584143 1347 ntBASIC5.79□□□□□ -1.48
CD40P25942 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.79□□□□□ -1.48
CD40P25942 AC005839.1-201ENST00000624148 3213 ntBASIC5.79□□□□□ -1.48
CD40P25942 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 AP005139.1-201ENST00000580702 1647 ntBASIC5.79□□□□□ -1.48
CD40P25942 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 BX322650.1-201ENST00000332359 2143 ntBASIC5.79□□□□□ -1.48
CD40P25942 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 SNORA38B-201ENST00000363524 131 ntBASIC5.79□□□□□ -1.48
CD40P25942 RNA5SP85-201ENST00000365378 119 ntBASIC5.79□□□□□ -1.48
CD40P25942 SNORA64.3-201ENST00000365647 134 ntBASIC5.79□□□□□ -1.48
CD40P25942 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD40P25942 Y_RNA.505-201ENST00000384489 102 ntBASIC5.79□□□□□ -1.48
CD40P25942 AL391419.1-201ENST00000398901 1275 ntBASIC5.79□□□□□ -1.48
CD40P25942 NUDT19P3-201ENST00000404698 555 ntBASIC5.79□□□□□ -1.48
CD40P25942 AL133260.1-201ENST00000405720 405 ntBASIC5.79□□□□□ -1.48
CD40P25942 RPL12P23-201ENST00000405880 490 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.79□□□□□ -1.48
CD40P25942 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.79□□□□□ -1.48
CD40P25942 RPL7P44-201ENST00000424827 742 ntBASIC5.79□□□□□ -1.48
CD40P25942 SEPT7P5-201ENST00000434048 306 ntBASIC5.79□□□□□ -1.48
CD40P25942 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CD40P25942 AC129850.1-201ENST00000436203 508 ntBASIC5.79□□□□□ -1.48
CD40P25942 AC092106.2-201ENST00000436597 487 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms