Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MRE11P1-201ENST00000464884 2127 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 GAPDHP24-201ENST00000328713 983 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 RNU6-386P-201ENST00000362650 107 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 RNA5SP435-201ENST00000364044 108 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 RPL34P3-201ENST00000421454 338 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 MTND6P12-201ENST00000428247 522 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC006335.2-201ENST00000437993 330 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 LINC02210-201ENST00000444561 288 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC005297.1-201ENST00000444765 862 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AL356390.1-201ENST00000455684 397 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 HSPE1P22-201ENST00000456856 327 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 RN7SL284P-201ENST00000498823 275 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AL590410.1-201ENST00000617925 333 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 TTC39DP-201ENST00000416781 1688 ntBASIC5.66□□□□□ -1.5
HLA-DPA1P20036 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DPA1P20036 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 RN7SKP292-201ENST00000365522 317 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AL009179.1-201ENST00000406085 265 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 TRIM60P17-201ENST00000415181 719 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AL354868.1-201ENST00000417077 482 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 OR51A6P-201ENST00000418680 1004 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 SETP20-201ENST00000457046 852 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 OR9N1P-201ENST00000491296 333 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC104109.1-201ENST00000498563 436 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 MTATP6P1-201ENST00000514057 681 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 GMCL1P2-201ENST00000605230 823 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC012213.4-201ENST00000606457 354 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC127024.6-201ENST00000621598 424 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 AC008691.1-209ENST00000642094 814 ntBASIC5.65□□□□□ -1.5
HLA-DPA1P20036 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DPA1P20036 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.65□□□□□ -1.51
HLA-DPA1P20036 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DPA1P20036 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DPA1P20036 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DPA1P20036 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.65□□□□□ -1.51
HLA-DPA1P20036 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HLA-DPA1P20036 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HLA-DPA1P20036 AC092070.2-203ENST00000598377 3644 ntBASIC5.65□□□□□ -1.51
HLA-DPA1P20036 SRRM1P3-201ENST00000426911 2678 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 MT-RNR2-201ENST00000387347 1559 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms