Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NDUFS5P5-201ENST00000437256 321 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.84□□□□□ -1.63
UBCP0CG48 AC073476.1-201ENST00000452854 407 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 RPSAP37-201ENST00000470913 821 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBCP0CG48 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.84□□□□□ -1.63
UBCP0CG48 AC021193.1-201ENST00000511607 420 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 TRIM51DP-201ENST00000529746 596 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 AC025423.2-201ENST00000537570 439 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.84□□□□□ -1.63
UBCP0CG48 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.84□□□□□ -1.63
UBCP0CG48 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.84□□□□□ -1.63
UBCP0CG48 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.84□□□□□ -1.63
UBCP0CG48 AP005262.1-201ENST00000582646 997 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.84□□□□□ -1.63
UBCP0CG48 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.84□□□□□ -1.63
UBCP0CG48 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.84□□□□□ -1.63
UBCP0CG48 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBCP0CG48 MIR6813-201ENST00000621638 56 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 AC129778.1-202ENST00000623812 261 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 AL390318.1-201ENST00000624564 687 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.84□□□□□ -1.63
UBCP0CG48 AL591379.1-207ENST00000635982 261 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.84□□□□□ -1.63
UBCP0CG48 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.84□□□□□ -1.63
UBCP0CG48 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBCP0CG48 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBCP0CG48 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UBCP0CG48 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.84□□□□□ -1.64
UBCP0CG48 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.84□□□□□ -1.64
UBCP0CG48 AC107021.2-201ENST00000567714 2095 ntBASIC4.84□□□□□ -1.64
UBCP0CG48 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBCP0CG48 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.84□□□□□ -1.64
UBCP0CG48 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
UBCP0CG48 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.83□□□□□ -1.64
UBCP0CG48 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 SOCS5P3-201ENST00000425115 1576 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.83□□□□□ -1.64
UBCP0CG48 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
UBCP0CG48 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.83□□□□□ -1.64
UBCP0CG48 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
UBCP0CG48 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
UBCP0CG48 RNU1-150P-201ENST00000362491 162 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 SNORA48.4-201ENST00000391089 134 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 RNA5SP241-201ENST00000391326 114 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 PPIAP9-201ENST00000403866 498 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 RAB9AP5-201ENST00000437794 597 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC006335.2-201ENST00000437993 330 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.83□□□□□ -1.64
UBCP0CG48 RAB9AP2-201ENST00000443911 597 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC087672.1-201ENST00000479876 766 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC122718.2-201ENST00000505325 591 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC098976.1-201ENST00000513014 541 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 Y_RNA.667-201ENST00000516212 107 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 AC084121.1-201ENST00000533882 835 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 AC079905.1-201ENST00000549280 475 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
UBCP0CG48 AL121839.1-201ENST00000556233 1185 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC135626.1-201ENST00000556983 435 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC026826.3-201ENST00000561747 158 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 ARGFXP2-201ENST00000579304 949 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC138207.8-204ENST00000579588 527 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.83□□□□□ -1.64
UBCP0CG48 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.83□□□□□ -1.64
UBCP0CG48 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.83□□□□□ -1.64
UBCP0CG48 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
UBCP0CG48 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.83□□□□□ -1.64
UBCP0CG48 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
UBCP0CG48 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 AC100757.1-201ENST00000616872 1835 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBCP0CG48 LINC01963-201ENST00000562038 3148 ntBASIC4.83□□□□□ -1.64
UBCP0CG48 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.83□□□□□ -1.64
UBCP0CG48 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBCP0CG48 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBCP0CG48 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBCP0CG48 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.82□□□□□ -1.64
UBCP0CG48 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms