Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HOXC6P09630 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXC6P09630 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HOXC6P09630 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC6P09630 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXC6P09630 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC6P09630 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
HOXC6P09630 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC6P09630 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC6P09630 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC6P09630 AL589826.1-201ENST00000340697 249 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC6P09630 SNORA70.9-201ENST00000384370 135 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 RNU1-149P-201ENST00000390870 161 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 PA2G4P6-201ENST00000438325 1197 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXC6P09630 AL672138.1-201ENST00000450604 1015 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 DNAJB5P1-201ENST00000454004 806 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 TAAR4P-201ENST00000454843 1039 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 AC089999.1-201ENST00000460336 374 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC6P09630 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXC6P09630 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXC6P09630 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.22□□□□□ -1.41
HOXC6P09630 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXC6P09630 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXC6P09630 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.22□□□□□ -1.41
HOXC6P09630 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXC6P09630 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 HIRAP1-201ENST00000605318 787 ntBASIC6.22□□□□□ -1.41
HOXC6P09630 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HOXC6P09630 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC6P09630 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC6P09630 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HOXC6P09630 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXC6P09630 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
HOXC6P09630 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
HOXC6P09630 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.21□□□□□ -1.41
HOXC6P09630 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
HOXC6P09630 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HOXC6P09630 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC6P09630 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXC6P09630 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC6P09630 RNA5SP487-201ENST00000410186 122 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC093162.1-201ENST00000419682 124 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC6P09630 EIF2S2P3-201ENST00000428356 999 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 RPL12P17-201ENST00000432393 498 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 RSL24D1P8-201ENST00000434442 492 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC006466.1-201ENST00000438721 289 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 NANOGP9-201ENST00000439890 892 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC6P09630 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 AC090114.3-201ENST00000479267 829 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC6P09630 MTND6P2-201ENST00000512226 524 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 RNA5SP228-201ENST00000516232 133 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 SCARNA16.4-201ENST00000516956 187 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC019227.1-201ENST00000526902 510 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXC6P09630 AC127381.1-201ENST00000555979 939 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC114947.2-201ENST00000565748 2125 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AL391001.1-201ENST00000602747 715 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC105148.1-201ENST00000604961 409 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC012467.1-201ENST00000607740 256 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC6P09630 AC016911.1-201ENST00000613297 452 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 AC100827.5-201ENST00000615883 426 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC6P09630 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC6P09630 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
HOXC6P09630 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
HOXC6P09630 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC6P09630 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC6P09630 AP004289.1-201ENST00000436307 2205 ntBASIC6.21□□□□□ -1.42
HOXC6P09630 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms