Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC006335.2-201ENST00000437993 330 ntBASIC6.03□□□□□ -1.44
RB1P06400 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.03□□□□□ -1.44
RB1P06400 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.03□□□□□ -1.44
RB1P06400 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.03□□□□□ -1.44
RB1P06400 SNRPCP2-201ENST00000504370 475 ntBASIC6.03□□□□□ -1.44
RB1P06400 AC105420.1-201ENST00000504389 582 ntBASIC6.03□□□□□ -1.44
RB1P06400 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.03□□□□□ -1.44
RB1P06400 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 AP001804.1-201ENST00000526868 919 ntBASIC6.03□□□□□ -1.44
RB1P06400 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RB1P06400 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 HSPE1P2-201ENST00000554777 306 ntBASIC6.03□□□□□ -1.44
RB1P06400 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.03□□□□□ -1.44
RB1P06400 AC007346.2-201ENST00000564816 892 ntBASIC6.03□□□□□ -1.44
RB1P06400 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.03□□□□□ -1.44
RB1P06400 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.03□□□□□ -1.44
RB1P06400 AC133644.2-201ENST00000608142 540 ntBASIC6.03□□□□□ -1.44
RB1P06400 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 AC009163.6-201ENST00000612367 342 ntBASIC6.03□□□□□ -1.44
RB1P06400 AL118508.4-201ENST00000624142 1176 ntBASIC6.03□□□□□ -1.44
RB1P06400 AL139254.3-201ENST00000641097 674 ntBASIC6.03□□□□□ -1.44
RB1P06400 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.03□□□□□ -1.44
RB1P06400 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.03□□□□□ -1.44
RB1P06400 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.02□□□□□ -1.45
RB1P06400 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.02□□□□□ -1.45
RB1P06400 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.02□□□□□ -1.45
RB1P06400 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.02□□□□□ -1.45
RB1P06400 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 RNA5SP335-201ENST00000363817 110 ntBASIC6.02□□□□□ -1.45
RB1P06400 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RB1P06400 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RB1P06400 RPA2P2-201ENST00000419698 796 ntBASIC6.02□□□□□ -1.45
RB1P06400 AC016027.5-201ENST00000427227 210 ntBASIC6.02□□□□□ -1.45
RB1P06400 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.02□□□□□ -1.45
RB1P06400 TRIM60P13-201ENST00000432350 1283 ntBASIC6.02□□□□□ -1.45
RB1P06400 RSL24D1P8-201ENST00000434442 492 ntBASIC6.02□□□□□ -1.45
RB1P06400 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.02□□□□□ -1.45
RB1P06400 REG1CP-206ENST00000447469 496 ntBASIC6.02□□□□□ -1.45
RB1P06400 AC007688.1-201ENST00000475592 759 ntBASIC6.02□□□□□ -1.45
RB1P06400 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.02□□□□□ -1.45
RB1P06400 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.02□□□□□ -1.45
RB1P06400 AP000619.2-201ENST00000546014 969 ntBASIC6.02□□□□□ -1.45
RB1P06400 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.02□□□□□ -1.45
RB1P06400 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.02□□□□□ -1.45
RB1P06400 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.02□□□□□ -1.45
RB1P06400 LSM1P2-201ENST00000604911 322 ntBASIC6.02□□□□□ -1.45
RB1P06400 AL118522.2-201ENST00000616045 615 ntBASIC6.02□□□□□ -1.45
RB1P06400 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
RB1P06400 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
RB1P06400 MFSD8-219ENST00000641228 2559 ntBASIC6.02□□□□□ -1.45
RB1P06400 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RB1P06400 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RB1P06400 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RB1P06400 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.01□□□□□ -1.45
RB1P06400 HSPA8P18-201ENST00000439846 1928 ntBASIC6.01□□□□□ -1.45
RB1P06400 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.01□□□□□ -1.45
RB1P06400 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
RB1P06400 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RB1P06400 SNORA70.9-201ENST00000384370 135 ntBASIC6.01□□□□□ -1.45
RB1P06400 AL360271.1-201ENST00000395679 510 ntBASIC6.01□□□□□ -1.45
RB1P06400 ARAFP1-201ENST00000422172 605 ntBASIC6.01□□□□□ -1.45
RB1P06400 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.01□□□□□ -1.45
RB1P06400 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RB1P06400 RPL7P61-201ENST00000451721 751 ntBASIC6.01□□□□□ -1.45
RB1P06400 RN7SL860P-201ENST00000473738 223 ntBASIC6.01□□□□□ -1.45
RB1P06400 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.01□□□□□ -1.45
RB1P06400 OR52A4P-202ENST00000481634 799 ntBASIC6.01□□□□□ -1.45
RB1P06400 AC109462.1-201ENST00000491087 368 ntBASIC6.01□□□□□ -1.45
RB1P06400 AC105384.2-201ENST00000508433 640 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms