Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC139365.2-201ENST00000517972 253 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.67□□□□□ -1.5
GPC4O75487 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.67□□□□□ -1.5
GPC4O75487 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.67□□□□□ -1.5
GPC4O75487 AC096996.1-201ENST00000563813 325 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 MIR4260-201ENST00000583107 67 ntBASIC5.67□□□□□ -1.5
GPC4O75487 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.67□□□□□ -1.5
GPC4O75487 FAM27E4-201ENST00000605259 342 ntBASIC5.67□□□□□ -1.5
GPC4O75487 HIRAP1-201ENST00000605318 787 ntBASIC5.67□□□□□ -1.5
GPC4O75487 NANOGP3-201ENST00000605855 286 ntBASIC5.67□□□□□ -1.5
GPC4O75487 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.67□□□□□ -1.5
GPC4O75487 AC084036.1-201ENST00000609190 508 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AC015922.4-201ENST00000612568 690 ntBASIC5.67□□□□□ -1.5
GPC4O75487 AL096712.1-201ENST00000614561 159 ntBASIC5.67□□□□□ -1.5
GPC4O75487 OR8G3P-202ENST00000641572 1255 ntBASIC5.67□□□□□ -1.5
GPC4O75487 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.67□□□□□ -1.5
GPC4O75487 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
GPC4O75487 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.67□□□□□ -1.5
GPC4O75487 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GPC4O75487 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GPC4O75487 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
GPC4O75487 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
GPC4O75487 RNA5SP91-201ENST00000390902 119 ntBASIC5.66□□□□□ -1.5
GPC4O75487 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.66□□□□□ -1.5
GPC4O75487 SLC20A1P1-201ENST00000413906 956 ntBASIC5.66□□□□□ -1.5
GPC4O75487 AK4P4-201ENST00000419465 646 ntBASIC5.66□□□□□ -1.5
GPC4O75487 AC017019.1-201ENST00000426129 261 ntBASIC5.66□□□□□ -1.5
GPC4O75487 MTND4LP7-201ENST00000431728 294 ntBASIC5.66□□□□□ -1.5
GPC4O75487 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.66□□□□□ -1.5
GPC4O75487 AL691517.1-201ENST00000440833 1235 ntBASIC5.66□□□□□ -1.5
GPC4O75487 OR7E116P-201ENST00000448529 957 ntBASIC5.66□□□□□ -1.5
GPC4O75487 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.66□□□□□ -1.5
GPC4O75487 AP006222.1-205ENST00000450734 457 ntBASIC5.66□□□□□ -1.5
GPC4O75487 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.66□□□□□ -1.5
GPC4O75487 AC074255.1-201ENST00000511259 501 ntBASIC5.66□□□□□ -1.5
GPC4O75487 GAPDHP62-201ENST00000515313 990 ntBASIC5.66□□□□□ -1.5
GPC4O75487 RNU6-491P-201ENST00000516099 110 ntBASIC5.66□□□□□ -1.5
GPC4O75487 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.66□□□□□ -1.5
GPC4O75487 FTH1P11-201ENST00000517577 551 ntBASIC5.66□□□□□ -1.5
GPC4O75487 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.66□□□□□ -1.5
GPC4O75487 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.66□□□□□ -1.5
GPC4O75487 AC074029.2-201ENST00000551045 634 ntBASIC5.66□□□□□ -1.5
GPC4O75487 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.66□□□□□ -1.5
GPC4O75487 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.66□□□□□ -1.5
GPC4O75487 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 AC092121.1-201ENST00000569452 202 ntBASIC5.66□□□□□ -1.5
GPC4O75487 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.66□□□□□ -1.5
GPC4O75487 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.66□□□□□ -1.5
GPC4O75487 AC022400.9-201ENST00000623633 273 ntBASIC5.66□□□□□ -1.5
GPC4O75487 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GPC4O75487 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GPC4O75487 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
GPC4O75487 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.66□□□□□ -1.5
GPC4O75487 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GPC4O75487 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
GPC4O75487 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
GPC4O75487 AC092111.2-201ENST00000611627 1414 ntBASIC5.65□□□□□ -1.5
GPC4O75487 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GPC4O75487 AC112198.2-201ENST00000426589 6996 ntBASIC5.65□□□□□ -1.5
GPC4O75487 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
GPC4O75487 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
GPC4O75487 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
GPC4O75487 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.65□□□□□ -1.5
GPC4O75487 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GPC4O75487 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GPC4O75487 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GPC4O75487 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GPC4O75487 RN7SKP185-201ENST00000362813 326 ntBASIC5.65□□□□□ -1.5
GPC4O75487 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GPC4O75487 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GPC4O75487 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GPC4O75487 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.65□□□□□ -1.5
GPC4O75487 HMGN1P20-201ENST00000411849 300 ntBASIC5.65□□□□□ -1.5
GPC4O75487 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.65□□□□□ -1.5
GPC4O75487 GAPDHP34-201ENST00000432112 823 ntBASIC5.65□□□□□ -1.5
GPC4O75487 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
GPC4O75487 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms