Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.22□□□□□ -1.57
HCN1O60741 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.22□□□□□ -1.57
HCN1O60741 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HCN1O60741 SNORA70.6-201ENST00000383934 134 ntBASIC5.22□□□□□ -1.57
HCN1O60741 RNU6-167P-201ENST00000384292 106 ntBASIC5.22□□□□□ -1.57
HCN1O60741 U3.25-201ENST00000391209 220 ntBASIC5.22□□□□□ -1.57
HCN1O60741 SNORA81-201ENST00000408493 178 ntBASIC5.22□□□□□ -1.57
HCN1O60741 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.22□□□□□ -1.57
HCN1O60741 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.22□□□□□ -1.57
HCN1O60741 AL662874.1-201ENST00000426065 230 ntBASIC5.22□□□□□ -1.57
HCN1O60741 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.22□□□□□ -1.57
HCN1O60741 AC092106.1-201ENST00000444291 373 ntBASIC5.22□□□□□ -1.57
HCN1O60741 AC005297.1-201ENST00000444765 862 ntBASIC5.22□□□□□ -1.57
HCN1O60741 VN1R96P-201ENST00000446052 858 ntBASIC5.22□□□□□ -1.57
HCN1O60741 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.22□□□□□ -1.57
HCN1O60741 RPS3AP15-201ENST00000483874 781 ntBASIC5.22□□□□□ -1.57
HCN1O60741 RPS7P6-201ENST00000485777 579 ntBASIC5.22□□□□□ -1.57
HCN1O60741 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.22□□□□□ -1.57
HCN1O60741 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 EIF3LP3-201ENST00000495197 822 ntBASIC5.22□□□□□ -1.57
HCN1O60741 RN7SL466P-201ENST00000497546 295 ntBASIC5.22□□□□□ -1.57
HCN1O60741 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.22□□□□□ -1.57
HCN1O60741 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 AC021678.3-201ENST00000517893 476 ntBASIC5.22□□□□□ -1.57
HCN1O60741 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.22□□□□□ -1.57
HCN1O60741 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.22□□□□□ -1.57
HCN1O60741 AL049872.1-201ENST00000556323 322 ntBASIC5.22□□□□□ -1.57
HCN1O60741 AC104695.2-201ENST00000605056 775 ntBASIC5.22□□□□□ -1.57
HCN1O60741 BX323046.1-201ENST00000610145 535 ntBASIC5.22□□□□□ -1.57
HCN1O60741 AC008833.1-201ENST00000611633 691 ntBASIC5.22□□□□□ -1.57
HCN1O60741 AL162574.1-201ENST00000615702 950 ntBASIC5.22□□□□□ -1.57
HCN1O60741 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 CU639417.4-201ENST00000623928 207 ntBASIC5.22□□□□□ -1.57
HCN1O60741 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.22□□□□□ -1.57
HCN1O60741 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
HCN1O60741 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HCN1O60741 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HCN1O60741 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HCN1O60741 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 CIR1P2-201ENST00000514821 1342 ntBASIC5.22□□□□□ -1.57
HCN1O60741 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HCN1O60741 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HCN1O60741 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.21□□□□□ -1.57
HCN1O60741 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HCN1O60741 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HCN1O60741 HSPA8P14-201ENST00000552265 1805 ntBASIC5.21□□□□□ -1.58
HCN1O60741 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HCN1O60741 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN1O60741 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN1O60741 LINC01963-201ENST00000562038 3148 ntBASIC5.21□□□□□ -1.58
HCN1O60741 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HCN1O60741 SNORA64.1-201ENST00000362600 132 ntBASIC5.21□□□□□ -1.58
HCN1O60741 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HCN1O60741 OR3A2-201ENST00000408891 1076 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AL121878.1-201ENST00000418638 859 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AL034379.1-201ENST00000423216 253 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AC113412.1-201ENST00000425840 504 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AC244033.1-201ENST00000426826 870 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.21□□□□□ -1.58
HCN1O60741 AC073909.1-201ENST00000447112 999 ntBASIC5.21□□□□□ -1.58
HCN1O60741 SNORD125-201ENST00000459538 96 ntBASIC5.21□□□□□ -1.58
HCN1O60741 RPS23P2-201ENST00000463671 415 ntBASIC5.21□□□□□ -1.58
HCN1O60741 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HCN1O60741 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN1O60741 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HCN1O60741 AC009120.1-201ENST00000493458 473 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN1O60741 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.21□□□□□ -1.58
HCN1O60741 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN1O60741 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN1O60741 DPPA2P4-201ENST00000563717 878 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN1O60741 AC006363.1-201ENST00000603806 463 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AC015849.6-201ENST00000605454 474 ntBASIC5.21□□□□□ -1.58
HCN1O60741 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN1O60741 AL390318.1-201ENST00000624564 687 ntBASIC5.21□□□□□ -1.58
HCN1O60741 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.21□□□□□ -1.58
HCN1O60741 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.21□□□□□ -1.58
HCN1O60741 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN1O60741 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
HCN1O60741 MRRFP1-201ENST00000435941 1675 ntBASIC5.21□□□□□ -1.58
HCN1O60741 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN1O60741 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN1O60741 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms