Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 OR51C1P-202ENST00000641159 1444 ntBASIC5.32□□□□□ -1.56
SNX3O60493 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX3O60493 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX3O60493 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SNX3O60493 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNX3O60493 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 MTHFD2P5-201ENST00000320415 844 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 RNA5SP500-201ENST00000364486 119 ntBASIC5.32□□□□□ -1.56
SNX3O60493 MIR7-1-201ENST00000384871 110 ntBASIC5.32□□□□□ -1.56
SNX3O60493 MIR27A-201ENST00000385073 78 ntBASIC5.32□□□□□ -1.56
SNX3O60493 DBIP1-201ENST00000401435 260 ntBASIC5.32□□□□□ -1.56
SNX3O60493 CDY17P-201ENST00000414121 1282 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AC012519.1-201ENST00000424588 610 ntBASIC5.32□□□□□ -1.56
SNX3O60493 CDY8P-201ENST00000428380 1279 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX3O60493 CDY20P-201ENST00000447528 1279 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 AC005077.1-201ENST00000449226 375 ntBASIC5.32□□□□□ -1.56
SNX3O60493 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 RPS17P15-201ENST00000475609 349 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX3O60493 HMGN1P17-201ENST00000513734 295 ntBASIC5.32□□□□□ -1.56
SNX3O60493 RFPL4AP3-201ENST00000515267 345 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX3O60493 SCARNA6.1-201ENST00000516989 238 ntBASIC5.32□□□□□ -1.56
SNX3O60493 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX3O60493 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX3O60493 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX3O60493 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SNX3O60493 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX3O60493 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 MIR4776-2-201ENST00000580204 80 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX3O60493 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 AL078624.2-201ENST00000605063 554 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AC025574.2-201ENST00000615621 514 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AC003001.2-201ENST00000616294 831 ntBASIC5.32□□□□□ -1.56
SNX3O60493 FAM27E2-201ENST00000619668 403 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AP003400.3-201ENST00000624904 346 ntBASIC5.32□□□□□ -1.56
SNX3O60493 AC022306.1-201ENST00000560489 1562 ntBASIC5.32□□□□□ -1.56
SNX3O60493 OR55B1P-203ENST00000641518 2602 ntBASIC5.32□□□□□ -1.56
SNX3O60493 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX3O60493 AC068870.3-201ENST00000625077 2536 ntBASIC5.32□□□□□ -1.56
SNX3O60493 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX3O60493 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SNX3O60493 PDZK1P1-202ENST00000425209 1350 ntBASIC5.31□□□□□ -1.56
SNX3O60493 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX3O60493 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX3O60493 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX3O60493 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SNX3O60493 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.31□□□□□ -1.56
SNX3O60493 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SNX3O60493 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX3O60493 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SNX3O60493 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX3O60493 AL353625.1-202ENST00000366273 571 ntBASIC5.31□□□□□ -1.56
SNX3O60493 MIR138-2-201ENST00000384916 84 ntBASIC5.31□□□□□ -1.56
SNX3O60493 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SNX3O60493 AC013442.1-201ENST00000397347 228 ntBASIC5.31□□□□□ -1.56
SNX3O60493 MTCO1P51-201ENST00000427672 1060 ntBASIC5.31□□□□□ -1.56
SNX3O60493 MTCO1P57-201ENST00000432182 261 ntBASIC5.31□□□□□ -1.56
SNX3O60493 PSMD8P1-201ENST00000436275 769 ntBASIC5.31□□□□□ -1.56
SNX3O60493 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX3O60493 AL031681.1-201ENST00000443304 400 ntBASIC5.31□□□□□ -1.56
SNX3O60493 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX3O60493 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.31□□□□□ -1.56
SNX3O60493 AL445991.1-201ENST00000450381 475 ntBASIC5.31□□□□□ -1.56
SNX3O60493 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX3O60493 CBX1P5-201ENST00000475330 559 ntBASIC5.31□□□□□ -1.56
SNX3O60493 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX3O60493 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX3O60493 HMGN1P16-201ENST00000508308 283 ntBASIC5.31□□□□□ -1.56
SNX3O60493 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX3O60493 MTND2P31-201ENST00000512602 616 ntBASIC5.31□□□□□ -1.56
SNX3O60493 AC117525.1-201ENST00000515228 503 ntBASIC5.31□□□□□ -1.56
SNX3O60493 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX3O60493 AP004607.5-201ENST00000532034 217 ntBASIC5.31□□□□□ -1.56
SNX3O60493 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX3O60493 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX3O60493 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX3O60493 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX3O60493 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX3O60493 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX3O60493 AC027281.1-201ENST00000574178 758 ntBASIC5.31□□□□□ -1.56
SNX3O60493 AC027796.1-201ENST00000575593 512 ntBASIC5.31□□□□□ -1.56
SNX3O60493 RN7SL657P-201ENST00000582431 293 ntBASIC5.31□□□□□ -1.56
SNX3O60493 MIR212-201ENST00000586026 110 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms