Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXA2O43364 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
HOXA2O43364 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXA2O43364 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXA2O43364 AC018644.1-201ENST00000429934 551 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXA2O43364 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.11□□□□□ -1.11
HOXA2O43364 PHB2P1-201ENST00000434943 890 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 RPL22P17-201ENST00000438729 315 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXA2O43364 MTND6P13-201ENST00000443510 523 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXA2O43364 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXA2O43364 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC8.11□□□□□ -1.11
HOXA2O43364 AL590365.1-201ENST00000450788 243 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 SLAMF6P1-201ENST00000451067 602 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.11□□□□□ -1.11
HOXA2O43364 AC025271.1-201ENST00000485045 429 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AC108688.1-201ENST00000485817 713 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 RPL21P42-201ENST00000488408 464 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AC093325.1-201ENST00000508378 326 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AC233724.10-201ENST00000510454 409 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AP003122.4-201ENST00000530980 758 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 SSU72P6-201ENST00000532644 488 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.11□□□□□ -1.11
HOXA2O43364 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.11□□□□□ -1.11
HOXA2O43364 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXA2O43364 MIR4437-201ENST00000581331 60 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC8.11□□□□□ -1.11
HOXA2O43364 AL136363.1-201ENST00000605349 337 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AC103710.4-201ENST00000609301 899 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.11□□□□□ -1.11
HOXA2O43364 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXA2O43364 AC139792.3-201ENST00000623525 224 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AC116563.2-201ENST00000624751 535 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
HOXA2O43364 MTCO1P9-201ENST00000505577 1534 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
HOXA2O43364 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.11□□□□□ -1.11
HOXA2O43364 SF3A3P1-201ENST00000446317 1477 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.11□□□□□ -1.11
HOXA2O43364 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXA2O43364 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
HOXA2O43364 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXA2O43364 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
HOXA2O43364 AL359922.3-201ENST00000624779 1670 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HOXA2O43364 GTF2H2B-203ENST00000508065 1432 ntBASIC8.11□□□□□ -1.11
HOXA2O43364 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HOXA2O43364 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
HOXA2O43364 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 OR2A3P-202ENST00000641249 1776 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
HOXA2O43364 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXA2O43364 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 Y_RNA.481-201ENST00000384373 102 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 RNU6-738P-201ENST00000384531 106 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 MIR606-201ENST00000384851 96 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
HOXA2O43364 MRPL32P1-201ENST00000406301 247 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 RN7SKP225-201ENST00000410405 352 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 AL355862.1-201ENST00000412705 353 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 RPLP1P10-201ENST00000413972 339 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 AC004986.1-201ENST00000414855 607 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HOXA2O43364 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXA2O43364 AL359633.1-201ENST00000421403 310 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 SDCBPP2-201ENST00000424643 885 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXA2O43364 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXA2O43364 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC8.1□□□□□ -1.11
HOXA2O43364 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXA2O43364 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 RPS20P20-201ENST00000460498 340 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 AC110749.1-201ENST00000462007 357 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 AC007547.2-201ENST00000468802 360 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.1□□□□□ -1.11
HOXA2O43364 NIFKP7-201ENST00000503365 834 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 AC111193.1-201ENST00000504097 155 ntBASIC8.1□□□□□ -1.11
HOXA2O43364 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC8.1□□□□□ -1.11
HOXA2O43364 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms