Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC007842.1-201ENST00000597336 2039 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC097063.1-201ENST00000426714 1797 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNA5SP30-201ENST00000365552 115 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC006455.6-201ENST00000426192 893 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL139148.1-201ENST00000427122 680 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 MGAT2P2-201ENST00000427194 797 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 NPM1P25-201ENST00000429734 854 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 CYCSP12-201ENST00000437729 300 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL645937.3-201ENST00000453647 936 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 RANP1-206ENST00000455094 651 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC079841.1-201ENST00000481228 950 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC026782.2-201ENST00000510845 636 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC021146.10-201ENST00000515628 706 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 MIR4660-201ENST00000583549 74 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC007786.3-201ENST00000615154 596 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC073136.1-201ENST00000449426 2884 ntBASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TMX2-CTNND1H3BSU7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC104964.3-201ENST00000606115 2860 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 CDY3P-201ENST00000454543 1618 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC005294.1-201ENST00000355509 281 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNA5SP507-201ENST00000363603 121 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SKP6-201ENST00000364795 319 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNU6-171P-201ENST00000384354 107 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL133270.1-201ENST00000402635 279 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 RPL23AP27-201ENST00000415161 451 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 HYALP1-201ENST00000417674 1279 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 NENFP1-201ENST00000419476 466 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 PTMAP6-201ENST00000439110 327 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 CNOT7P2-201ENST00000441051 832 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SL727P-201ENST00000482164 296 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC105384.2-201ENST00000508433 640 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 HMGN2P6-201ENST00000551091 273 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 LSM3P2-201ENST00000551246 273 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 RPSAP73-201ENST00000614820 330 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 MIR6133-201ENST00000617057 108 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC005618.4-201ENST00000625053 554 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC139426.3-201ENST00000605648 2059 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AP004607.3-201ENST00000530354 3915 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC109780.1-201ENST00000451768 1344 ntBASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TMX2-CTNND1H3BSU7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 SNORA70.6-201ENST00000383934 134 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL133325.1-201ENST00000421090 382 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 CEACAMP7-201ENST00000444105 496 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 GAPDHP14-201ENST00000450472 937 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms