Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 TRBV8-2-201ENST00000475637 270 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 LTV1P1-201ENST00000510683 1237 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 IGKV3D-31-201ENST00000519131 281 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC087808.1-201ENST00000520501 361 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 IGLV2-28-201ENST00000520681 304 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 SMARCE1P4-201ENST00000523647 241 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC006362.1-201ENST00000567392 174 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AP002884.5-201ENST00000595053 1132 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC131235.4-201ENST00000609288 620 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC063952.1-203ENST00000634410 658 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC092104.1-201ENST00000497346 1441 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 LARP1P1-201ENST00000407692 292 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 RNU6-575P-201ENST00000411326 105 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC022028.1-201ENST00000412054 408 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AL603650.1-201ENST00000412680 240 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 ELOCP17-201ENST00000414751 326 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AL513325.1-201ENST00000417716 1034 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 Z99497.1-201ENST00000421282 135 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC007394.1-201ENST00000421941 531 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 HMGB1P45-201ENST00000435986 653 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 CACYBPP1-201ENST00000438592 684 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AL163193.1-201ENST00000444895 788 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 COX6CP2-201ENST00000444980 225 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 RFC5P1-201ENST00000454419 874 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 RNU7-27P-201ENST00000459281 62 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 SRRM1P2-201ENST00000464531 1192 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 RPL7P16-201ENST00000479738 738 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC022880.1-201ENST00000534017 973 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC092851.1-201ENST00000535964 478 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC128687.1-201ENST00000605304 619 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC239868.4-201ENST00000608318 671 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC010401.2-201ENST00000575137 4934 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms