Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 MTND2P17-201ENST00000550281 688 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AL390334.1-201ENST00000556395 450 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 RN7SL230P-201ENST00000580835 303 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AP002884.5-201ENST00000595053 1132 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC005828.7-201ENST00000607331 556 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC096586.2-201ENST00000610260 441 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC068726.1-201ENST00000610993 341 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC015819.1-201ENST00000613588 663 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC025574.2-201ENST00000615621 514 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 MIR6839-201ENST00000620425 113 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 AC073869.8-201ENST00000641806 335 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 SCN1A-220ENST00000641603 12506 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 TTC39DP-201ENST00000416781 1688 ntBASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RBFOX3A6NFN3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 RNA5SP77-201ENST00000365394 120 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 PRELID1P1-201ENST00000403549 660 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AL009179.1-201ENST00000406085 265 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AL359885.1-201ENST00000415786 903 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 SETP10-201ENST00000424368 814 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC046176.1-201ENST00000435260 1170 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC128677.1-201ENST00000436016 442 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 BTF3P6-201ENST00000448054 499 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 YRDCP3-201ENST00000456507 480 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 RN7SL447P-201ENST00000494711 245 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 RPL15P21-201ENST00000495592 567 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC139365.2-201ENST00000517972 253 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AP003033.2-201ENST00000528901 805 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 MIR4311-201ENST00000580794 100 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC011891.2-201ENST00000604949 397 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 MIR6889-201ENST00000613185 59 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 AC089999.3-201ENST00000622440 577 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
RBFOX3A6NFN3 MT-RNR2-201ENST00000387347 1559 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AP000542.2-201ENST00000623199 6179 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 CR383656.5-201ENST00000547616 1340 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms