Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 UGT2B24P-201ENST00000514441 1597 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AP001284.1-201ENST00000528393 2118 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC016745.2-201ENST00000608834 3443 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 RNA5SP339-201ENST00000390987 122 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 RPSAP35-201ENST00000413753 818 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 SLC35E1P1-201ENST00000419313 864 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 SRSF1P1-201ENST00000424058 520 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 SNORD125-201ENST00000459538 96 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 AC026782.2-201ENST00000510845 636 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 OR5AM1P-201ENST00000532136 1032 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 AC122688.1-201ENST00000541494 223 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 AL049779.2-201ENST00000553847 315 ntBASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CLCF1Q9UBD9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 SNORA16A-201ENST00000384342 137 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 SNORA81-201ENST00000408493 178 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AL133325.1-201ENST00000421090 382 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 DSTNP5-201ENST00000427921 523 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AL121578.1-201ENST00000428051 892 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 BTG3P1-201ENST00000435859 716 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AL672138.1-201ENST00000450604 1015 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 RN7SL727P-201ENST00000482164 296 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 RPS4XP1-201ENST00000482189 787 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 RN7SL30P-201ENST00000488416 306 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC006499.3-201ENST00000506077 748 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 PGAM1P13-201ENST00000507497 754 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 MTND6P2-201ENST00000512226 524 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 GAPDHP62-201ENST00000515313 990 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC016180.1-201ENST00000567945 403 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 LSM1P2-201ENST00000604911 322 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC018690.1-201ENST00000608144 626 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC068870.1-201ENST00000563737 2455 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 AC093671.1-201ENST00000624981 2929 ntBASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLCF1Q9UBD9 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCF1Q9UBD9 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms