Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC106730.2-201ENST00000566641 540 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 MIR3176-201ENST00000582210 90 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 AC109309.2-201ENST00000612597 332 ntBASIC5.68□□□□□ -1.5
CISHQ9NSE2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CISHQ9NSE2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CISHQ9NSE2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AL669831.5-218ENST00000591702 1873 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 RNU1-146P-201ENST00000364015 165 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 MIR105-1-201ENST00000385222 81 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 RPL19P16-201ENST00000433839 588 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC079168.1-201ENST00000458741 345 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 CBX1P5-201ENST00000475330 559 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 RPL7P6-201ENST00000480903 738 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 RPL7P40-201ENST00000481703 745 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 RPS4XP1-201ENST00000482189 787 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 RPS24P16-201ENST00000497294 392 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC022360.1-201ENST00000521058 340 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC007225.2-201ENST00000562529 256 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 MTCO1P1-201ENST00000624263 1081 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 CYP4F35P-202ENST00000636121 390 ntBASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CISHQ9NSE2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CISHQ9NSE2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CISHQ9NSE2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CISHQ9NSE2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 MTCO1P11-201ENST00000429111 1528 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 OR9G4-201ENST00000302957 984 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CISHQ9NSE2 SNORA51.1-201ENST00000363243 140 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 SNORA67-201ENST00000384423 137 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 RNA5SP241-201ENST00000391326 114 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.66□□□□□ -1.5
CISHQ9NSE2 RPS12P31-201ENST00000491419 398 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 RPL15P21-201ENST00000495592 567 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 AC105420.1-201ENST00000504389 582 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 AC024558.1-201ENST00000505008 528 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 AC092709.1-201ENST00000521355 1045 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.66□□□□□ -1.5
CISHQ9NSE2 AL049779.2-201ENST00000553847 315 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.66□□□□□ -1.5
CISHQ9NSE2 NPM1P5-201ENST00000557228 838 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 RN7SL290P-201ENST00000578661 300 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 AC069307.1-201ENST00000602820 447 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 AL162431.4-201ENST00000604674 411 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 MIR6886-201ENST00000619864 61 ntBASIC5.66□□□□□ -1.5
CISHQ9NSE2 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.66□□□□□ -1.5
CISHQ9NSE2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CISHQ9NSE2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CISHQ9NSE2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CISHQ9NSE2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CISHQ9NSE2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CISHQ9NSE2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CISHQ9NSE2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms