Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AL845552.1-201ENST00000556820 323 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC023158.1-201ENST00000561632 1025 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC026826.3-201ENST00000561747 158 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC002310.3-201ENST00000569728 723 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 MIR4776-2-201ENST00000580204 80 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 HIRAP1-201ENST00000605318 787 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC108673.3-201ENST00000609183 335 ntBASIC5.58□□□□□ -1.52
BRF2Q9HAW0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
BRF2Q9HAW0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 RBPJP2-201ENST00000618187 1444 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AL606537.1-201ENST00000607258 2011 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 COX6B1P3-201ENST00000312310 260 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 RNFT1P3-201ENST00000340898 1052 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 RN7SKP171-201ENST00000364417 303 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 RNU6-650P-201ENST00000365658 111 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 TAF9BP2-201ENST00000400856 499 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 PTGES3P2-201ENST00000407942 482 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 RPS6P14-201ENST00000425165 719 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 CLNS1AP1-201ENST00000435954 682 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 VN1R110P-201ENST00000438988 971 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 ELOCP3-201ENST00000439303 348 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 ATP5LP2-201ENST00000440646 311 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 EEF1B2P3-201ENST00000447718 678 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 RPL23AP23-201ENST00000452590 471 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 MEMO1P4-201ENST00000453590 386 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 MTND2P6-201ENST00000455337 1030 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC068228.1-201ENST00000461723 211 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 OR7E157P-201ENST00000494376 911 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 LSM3P4-201ENST00000502948 309 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC092349.1-201ENST00000504903 310 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC122718.2-201ENST00000505325 591 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 RN7SKP238-201ENST00000516483 249 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 VTA1P2-201ENST00000520205 911 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC084121.1-201ENST00000533882 835 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AL049870.4-201ENST00000555741 486 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 CBX3P2-202ENST00000583365 535 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC253576.2-201ENST00000618815 580 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AL591926.1-201ENST00000620542 217 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC074140.1-201ENST00000621617 208 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 MIR6806-201ENST00000622141 64 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC022400.9-201ENST00000623633 273 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 OR11H2-202ENST00000641517 1085 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 AC079776.5-201ENST00000641920 211 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 ZNF733P-202ENST00000444809 1573 ntBASIC5.57□□□□□ -1.52
BRF2Q9HAW0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.57□□□□□ -1.52
BRF2Q9HAW0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms