Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 AP005901.5-201ENST00000545779 1796 ntBASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
COL25A1Q9BXS0 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC013444.1-201ENST00000428909 1904 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 COX6B1P3-201ENST00000312310 260 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC011155.1-201ENST00000316512 456 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 DNAJC19P6-201ENST00000401853 280 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 LARP1P1-201ENST00000407692 292 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 RNA5SP80-201ENST00000410475 111 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AMD1P2-201ENST00000412936 992 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 TAF13P2-201ENST00000416876 286 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC092170.1-201ENST00000440211 356 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC239367.2-201ENST00000447309 705 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 PDSS1P2-201ENST00000449397 678 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC115223.1-201ENST00000466377 870 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 LARP1BP2-201ENST00000486594 519 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC098799.3-201ENST00000506095 438 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 SAP18P1-201ENST00000512058 390 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 RNU6-277P-201ENST00000516272 106 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 RNU6-430P-201ENST00000517078 107 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC093249.1-201ENST00000567049 203 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 MIR3149-201ENST00000584629 83 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC011712.1-201ENST00000588959 234 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC007363.1-201ENST00000604736 620 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AL133215.3-201ENST00000609801 448 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 IGHV3-54-201ENST00000622166 353 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 MIR1302-1-201ENST00000637932 143 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 MFSD8-245ENST00000641743 948 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 LYARP1-201ENST00000436977 1501 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 AC135352.1-201ENST00000506173 1418 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 HSPD1P7-201ENST00000447985 1686 ntBASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
COL25A1Q9BXS0 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC104083.1-201ENST00000569449 2615 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL25A1Q9BXS0 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms