Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 Y_RNA.70-201ENST00000362886 110 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RNA5SP382-201ENST00000363355 112 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RN7SKP191-201ENST00000364713 306 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC092634.1-201ENST00000366505 199 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RNU6-1200P-201ENST00000384162 107 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MIR551B-201ENST00000384984 96 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL050335.1-201ENST00000396909 869 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MIR1266-201ENST00000408125 84 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RNU6-757P-201ENST00000410334 100 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RNU2-66P-201ENST00000410650 161 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MTND1P14-201ENST00000427400 950 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC104651.1-201ENST00000427559 735 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 CDY14P-201ENST00000431260 1014 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MTND1P30-201ENST00000441241 901 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MTND3P1-201ENST00000441336 220 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 HMGN1P32-201ENST00000441744 256 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 GTF3AP5-201ENST00000442645 697 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL356121.1-201ENST00000442911 156 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC003071.1-201ENST00000451219 789 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 CDY23P-201ENST00000451661 1014 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC022080.2-201ENST00000452932 533 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 CST12P-201ENST00000457644 362 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RN7SL502P-201ENST00000481857 290 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC026826.1-201ENST00000493002 361 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RPS10P20-201ENST00000494130 463 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RN7SL612P-201ENST00000497704 295 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC009567.2-201ENST00000502989 349 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC112198.1-201ENST00000505369 1220 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC074344.1-201ENST00000512823 224 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC093878.1-201ENST00000515630 432 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 OR8Q1P-201ENST00000526467 655 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AP000619.3-201ENST00000535634 1127 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 BTG1P1-201ENST00000540396 508 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC007954.1-201ENST00000554198 494 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC020914.7-201ENST00000594477 545 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC036176.3-201ENST00000602456 418 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RPS4XP21-201ENST00000603814 750 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC069545.1-201ENST00000605671 358 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC008945.2-201ENST00000606056 604 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC004908.1-201ENST00000606572 541 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL137000.1-201ENST00000610528 1244 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL139418.1-201ENST00000613613 177 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL121873.1-201ENST00000616013 524 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC109454.4-201ENST00000623411 649 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC127502.3-201ENST00000636170 1206 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AL512329.1-201ENST00000404600 1592 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 EIF3EP1-201ENST00000433978 1316 ntBASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSBP3Q9BWW4 AC007998.4-201ENST00000612496 2533 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms