Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC080013.4-201ENST00000607624 649 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AL135786.2-201ENST00000608422 615 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC121761.2-201ENST00000617300 689 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AL354718.1-201ENST00000619764 589 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 AC079248.2-201ENST00000623779 326 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 SNX18P12-201ENST00000624821 759 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 NEK2P2-201ENST00000438441 1338 ntBASIC7.43□□□□□ -1.22
SYNGAP1Q96PV0 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 MTND5P11-201ENST00000511037 1812 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 CYP2G2P-201ENST00000594920 1485 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 GTF2IP2-201ENST00000424290 697 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AL096803.2-201ENST00000450032 677 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 MRPL42P4-201ENST00000453267 443 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 RPSAP37-201ENST00000470913 821 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 RPL7P16-201ENST00000479738 738 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC104685.1-201ENST00000502445 371 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC008837.1-201ENST00000511513 412 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 NDUFB4P12-201ENST00000513465 390 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 RNU6-319P-201ENST00000516025 108 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC020937.1-201ENST00000519677 1013 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 NPIPB14P-203ENST00000532298 987 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC008055.1-201ENST00000547032 609 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AL138895.2-201ENST00000603019 178 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AL031775.1-201ENST00000607014 887 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 U6atac.1-201ENST00000616025 117 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 BRD7P1-201ENST00000557705 1915 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC078880.4-201ENST00000617627 1749 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 AC073544.1-201ENST00000600110 1595 ntBASIC7.42□□□□□ -1.22
SYNGAP1Q96PV0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AP000641.1-201ENST00000531988 1639 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 AC005832.2-201ENST00000538921 1430 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 HSPD1P11-201ENST00000508643 1702 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 MIR365B-201ENST00000362317 111 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 SNORA77.2-201ENST00000408571 112 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 RN7SKP144-201ENST00000411108 279 ntBASIC7.41□□□□□ -1.22
SYNGAP1Q96PV0 SEPT7P8-201ENST00000413308 775 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms