Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC7Q96M83 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC7Q96M83 RBM22P1-201ENST00000578589 1214 ntBASIC7.54□□□□□ -1.2
CCDC7Q96M83 RN7SL356P-201ENST00000582228 248 ntBASIC7.54□□□□□ -1.2
CCDC7Q96M83 MIR7853-201ENST00000584820 132 ntBASIC7.54□□□□□ -1.2
CCDC7Q96M83 AC126915.2-201ENST00000610957 190 ntBASIC7.54□□□□□ -1.2
CCDC7Q96M83 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC7Q96M83 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC7Q96M83 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CCDC7Q96M83 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC7Q96M83 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC7Q96M83 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC7Q96M83 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC7Q96M83 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC7Q96M83 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC7Q96M83 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC7Q96M83 AC006600.2-201ENST00000624834 2506 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC7Q96M83 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC7Q96M83 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC7Q96M83 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
CCDC7Q96M83 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CCDC7Q96M83 RNA5SP335-201ENST00000363817 110 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 AL354766.1-201ENST00000423396 542 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.53□□□□□ -1.2
CCDC7Q96M83 VN1R54P-201ENST00000435210 1049 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 RPL35AP28-201ENST00000459730 331 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 AP000676.2-201ENST00000529711 301 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC7Q96M83 BLZF2P-201ENST00000553776 1130 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 AC090510.2-201ENST00000617465 629 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 MTCO1P1-201ENST00000624263 1081 ntBASIC7.53□□□□□ -1.2
CCDC7Q96M83 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC7Q96M83 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC7Q96M83 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC7Q96M83 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC7Q96M83 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
CCDC7Q96M83 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC092681.1-201ENST00000297369 291 ntBASIC7.52□□□□□ -1.21
CCDC7Q96M83 AL645733.1-201ENST00000402250 217 ntBASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC105399.1-202ENST00000447303 205 ntBASIC7.52□□□□□ -1.21
CCDC7Q96M83 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 RPEP1-201ENST00000504507 658 ntBASIC7.52□□□□□ -1.21
CCDC7Q96M83 HMGB1P44-201ENST00000508597 572 ntBASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC097486.1-201ENST00000515331 210 ntBASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC073342.3-201ENST00000624211 193 ntBASIC7.52□□□□□ -1.21
CCDC7Q96M83 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC7Q96M83 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 AC137056.2-201ENST00000624055 1958 ntBASIC7.52□□□□□ -1.21
CCDC7Q96M83 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.52□□□□□ -1.21
CCDC7Q96M83 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC7Q96M83 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC7Q96M83 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC7Q96M83 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC7Q96M83 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC7Q96M83 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC7Q96M83 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 RNA5SP339-201ENST00000390987 122 ntBASIC7.51□□□□□ -1.21
CCDC7Q96M83 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 AC108075.1-201ENST00000424692 529 ntBASIC7.51□□□□□ -1.21
CCDC7Q96M83 AL590762.4-201ENST00000425885 253 ntBASIC7.51□□□□□ -1.21
CCDC7Q96M83 RPL5P2-201ENST00000429598 854 ntBASIC7.51□□□□□ -1.21
CCDC7Q96M83 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 AC058823.1-201ENST00000485315 474 ntBASIC7.51□□□□□ -1.21
CCDC7Q96M83 IMPA1P1-201ENST00000510718 842 ntBASIC7.51□□□□□ -1.21
CCDC7Q96M83 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC7Q96M83 HMGN1P9-201ENST00000515212 298 ntBASIC7.51□□□□□ -1.21
CCDC7Q96M83 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 AC087763.1-201ENST00000603391 286 ntBASIC7.51□□□□□ -1.21
CCDC7Q96M83 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC7Q96M83 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC7Q96M83 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC7Q96M83 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC7Q96M83 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC7Q96M83 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.51□□□□□ -1.21
CCDC7Q96M83 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC7Q96M83 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CCDC7Q96M83 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC7Q96M83 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms