Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC027279.1-201ENST00000568885 4284 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 RNA5SP46-201ENST00000362370 120 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 U3.25-201ENST00000391209 220 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC007161.1-204ENST00000423039 460 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 MGAT2P2-201ENST00000427194 797 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AL022331.1-201ENST00000429025 477 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 HMGB3P24-201ENST00000433260 622 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC006335.2-201ENST00000437993 330 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC109481.1-201ENST00000509173 282 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 HMGN1P9-201ENST00000515212 298 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 RNA5SP230-201ENST00000517039 122 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 IGBP1P1-201ENST00000554337 1009 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 MIR4505-201ENST00000582238 73 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 MIR4660-201ENST00000583549 74 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 H3F3BP2-201ENST00000583907 357 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC010503.3-201ENST00000594355 540 ntBASIC5.61□□□□□ -1.51
C9orf72Q96LT7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf72Q96LT7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 MRE11P1-201ENST00000464884 2127 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC092376.2-201ENST00000622621 4116 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC097063.1-201ENST00000426714 1797 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 SNORA64.1-201ENST00000362600 132 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AL662874.1-201ENST00000426065 230 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 RPS23P6-201ENST00000466136 431 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 SNORA70.11-201ENST00000515987 138 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 SNORA70.13-201ENST00000516116 138 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AP000769.2-201ENST00000602344 396 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 AC068870.3-201ENST00000625077 2536 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 ADAM5-202ENST00000399789 1942 ntBASIC5.6□□□□□ -1.51
C9orf72Q96LT7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf72Q96LT7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf72Q96LT7 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 315.7 ms