Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TRIM47Q96LD4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC017002.4-201ENST00000604721 1525 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 OR2M1P-201ENST00000318104 951 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 RN7SKP174-201ENST00000363803 330 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 RN7SKP226-201ENST00000364912 300 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AL139184.1-202ENST00000422303 222 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 CYCSP46-201ENST00000423569 204 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 USP9YP36-201ENST00000424581 829 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC079807.1-201ENST00000429993 481 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 FTH1P10-202ENST00000430907 550 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 GPM6BP2-201ENST00000432046 144 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 TRIM60P18-201ENST00000441518 828 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 GPM6BP1-201ENST00000446387 144 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 RPL5P24-201ENST00000463742 885 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 RPS3AP17-201ENST00000472594 777 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC122718.2-201ENST00000505325 591 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 GUSBP9-201ENST00000510138 584 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC006530.1-201ENST00000555980 571 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC105275.2-201ENST00000567907 711 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 RN7SL667P-201ENST00000582817 298 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC008507.1-201ENST00000587506 734 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AP001429.1-201ENST00000602568 530 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC073091.2-201ENST00000603205 907 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AP000894.4-201ENST00000610185 483 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AL357080.1-201ENST00000617394 239 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 MIR6503-201ENST00000622884 86 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AP003122.6-201ENST00000623831 495 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC127502.3-201ENST00000636170 1206 ntBASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM47Q96LD4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms