Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPS4XP16-201ENST00000427198 791 ntBASIC6.51□□□□□ -1.37
SNED1Q8TER0 VDAC1P6-201ENST00000430062 855 ntBASIC6.51□□□□□ -1.37
SNED1Q8TER0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 KNOP1P3-201ENST00000446933 426 ntBASIC6.51□□□□□ -1.37
SNED1Q8TER0 TPT1P13-201ENST00000449760 499 ntBASIC6.51□□□□□ -1.37
SNED1Q8TER0 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 AC060780.2-201ENST00000589047 198 ntBASIC6.51□□□□□ -1.37
SNED1Q8TER0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 AL353729.2-201ENST00000605859 1249 ntBASIC6.51□□□□□ -1.37
SNED1Q8TER0 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNED1Q8TER0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
SNED1Q8TER0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 RNU6-398P-201ENST00000384143 109 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 SNORA70.9-201ENST00000384370 135 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 RN7SL423P-201ENST00000486202 304 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 PRELID3BP5-201ENST00000508612 460 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 AC109464.1-201ENST00000511091 819 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 C1GALT1P3-201ENST00000522049 819 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 IRF5P1-201ENST00000504852 2164 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AC007114.2-201ENST00000576014 4281 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNED1Q8TER0 MIR1182-201ENST00000408363 97 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 NDUFA5P8-201ENST00000449019 346 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 BTF3P13-201ENST00000513224 490 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AP005432.2-201ENST00000608162 586 ntBASIC6.5□□□□□ -1.37
SNED1Q8TER0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SNED1Q8TER0 AC010401.2-201ENST00000575137 4934 ntBASIC6.49□□□□□ -1.37
SNED1Q8TER0 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.49□□□□□ -1.37
SNED1Q8TER0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNED1Q8TER0 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
SNED1Q8TER0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SNED1Q8TER0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.49□□□□□ -1.37
SNED1Q8TER0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNED1Q8TER0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.49□□□□□ -1.37
SNED1Q8TER0 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SNED1Q8TER0 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNED1Q8TER0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNED1Q8TER0 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNED1Q8TER0 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.49□□□□□ -1.37
SNED1Q8TER0 AC114774.1-201ENST00000507410 1770 ntBASIC6.49□□□□□ -1.37
SNED1Q8TER0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNED1Q8TER0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms