Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC122713.2-201ENST00000624942 3335 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 NEK2P4-201ENST00000425793 1329 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 RNY4P24-201ENST00000362735 96 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 RNA5SP232-201ENST00000364144 119 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TAF9BP2-201ENST00000400856 499 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL359694.1-201ENST00000403247 604 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 VN1R12P-201ENST00000403778 876 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CYCSP17-201ENST00000407870 315 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC008173.1-201ENST00000418901 264 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 HIGD1AP12-201ENST00000427832 281 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 B3GNT2P1-201ENST00000434960 952 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC097359.1-201ENST00000447946 463 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CEACAMP5-201ENST00000448037 961 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 OR52Y1P-201ENST00000452418 828 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TPT1P7-201ENST00000458300 517 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC104339.1-201ENST00000465478 348 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 SETP11-201ENST00000473027 690 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 RPS27AP16-201ENST00000492222 470 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC112198.1-201ENST00000505369 1220 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC021146.7-201ENST00000509604 775 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 OR6C7P-201ENST00000547875 934 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC009729.1-201ENST00000548873 1133 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC011611.5-201ENST00000552477 578 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TPRKBP2-201ENST00000565969 475 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 MIR4271-201ENST00000582451 67 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 U73023.1-201ENST00000603134 700 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC111186.1-201ENST00000604684 130 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC011891.2-201ENST00000604949 397 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AC006270.3-201ENST00000605967 1036 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL645933.2-201ENST00000606743 1207 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 U4.5-201ENST00000617137 123 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL162377.2-201ENST00000624532 337 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AL596275.2-203ENST00000641951 371 ntBASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SHKBP1Q8TBC3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 DDX43P1-201ENST00000510713 1763 ntBASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SHKBP1Q8TBC3 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms