Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL009179.1-201ENST00000406085 265 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 RPL12P9-201ENST00000412942 488 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 RPS6P23-201ENST00000413224 722 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 PCNPP4-201ENST00000414817 517 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 RPS3P2-201ENST00000421346 701 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 IPPKP1-201ENST00000422501 768 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 PPIAP20-201ENST00000449839 135 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 RN7SL57P-201ENST00000493687 290 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 RPS24P16-201ENST00000497294 392 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 AC104109.1-201ENST00000498563 436 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 LDHAP1-201ENST00000509421 992 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 AC060775.1-201ENST00000518241 520 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 AC079905.1-201ENST00000549280 475 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 AC007956.1-201ENST00000555623 542 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 MIR4776-2-201ENST00000580204 80 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 AC008521.2-201ENST00000591021 259 ntBASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CCDC112Q8NEF3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC100778.3-201ENST00000580060 1750 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AL159987.1-201ENST00000347911 293 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 SUGT1P2-201ENST00000379452 992 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 RPSAP35-201ENST00000413753 818 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 NENFP1-201ENST00000419476 466 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 CFL1P4-201ENST00000451536 498 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 RPS12P31-201ENST00000491419 398 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 SCARNA20.4-201ENST00000516969 131 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC100784.1-201ENST00000522790 310 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC006349.1-201ENST00000555526 235 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 PDZK1P1-202ENST00000425209 1350 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AL731566.1-201ENST00000620490 1937 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 AP001642.1-201ENST00000624727 2117 ntBASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC112Q8NEF3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC112Q8NEF3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC112Q8NEF3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC112Q8NEF3 AC017079.1-201ENST00000333650 415 ntBASIC6□□□□□ -1.45
CCDC112Q8NEF3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 AC007161.1-204ENST00000423039 460 ntBASIC6□□□□□ -1.45
CCDC112Q8NEF3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 AL157385.1-201ENST00000446973 268 ntBASIC6□□□□□ -1.45
CCDC112Q8NEF3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC112Q8NEF3 ASNSP4-201ENST00000511103 447 ntBASIC6□□□□□ -1.45
CCDC112Q8NEF3 SETP21-201ENST00000514799 892 ntBASIC6□□□□□ -1.45
CCDC112Q8NEF3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 AC021678.3-201ENST00000517893 476 ntBASIC6□□□□□ -1.45
CCDC112Q8NEF3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6□□□□□ -1.45
CCDC112Q8NEF3 IGKV3D-34-201ENST00000522638 302 ntBASIC6□□□□□ -1.45
CCDC112Q8NEF3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms