Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 RN7SL290P-201ENST00000578661 300 ntBASIC8.22□□□□□ -1.09
VPS8Q8N3P4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 RN7SKP104-201ENST00000362605 328 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 RNU11-201ENST00000387069 134 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 RPL19P16-201ENST00000433839 588 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 SBDSP1-204ENST00000453858 737 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 RN7SL329P-201ENST00000467740 299 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 RN7SL826P-201ENST00000479724 288 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 AL360012.1-201ENST00000602813 131 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
VPS8Q8N3P4 AC118658.2-201ENST00000618697 459 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 AC002090.1-201ENST00000625000 2138 ntBASIC8.21□□□□□ -1.09
VPS8Q8N3P4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VPS8Q8N3P4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.21□□□□□ -1.1
VPS8Q8N3P4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
VPS8Q8N3P4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VPS8Q8N3P4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC8.21□□□□□ -1.1
VPS8Q8N3P4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.21□□□□□ -1.1
VPS8Q8N3P4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VPS8Q8N3P4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 HSPA8P15-201ENST00000401676 786 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 AC073850.1-201ENST00000449243 255 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 AC022360.1-201ENST00000521058 340 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 BNIP3P32-201ENST00000600015 554 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 RN7SKP153-201ENST00000365026 316 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 GPS2P1-201ENST00000411761 986 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 RPL34P20-201ENST00000442771 351 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 KNOP1P3-201ENST00000446933 426 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 AC097484.1-201ENST00000471148 389 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 RPS18P6-201ENST00000476880 458 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 AC092490.3-201ENST00000545370 572 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 MTCYBP13-201ENST00000578634 1093 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 AC211433.2-201ENST00000608433 387 ntBASIC8.2□□□□□ -1.1
VPS8Q8N3P4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS8Q8N3P4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC8.19□□□□□ -1.1
VPS8Q8N3P4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC8.19□□□□□ -1.1
VPS8Q8N3P4 NPM1P22-201ENST00000427761 952 ntBASIC8.19□□□□□ -1.1
VPS8Q8N3P4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 RPL32P9-201ENST00000487963 407 ntBASIC8.19□□□□□ -1.1
VPS8Q8N3P4 RPL37AP8-201ENST00000494116 276 ntBASIC8.19□□□□□ -1.1
VPS8Q8N3P4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS8Q8N3P4 MIR4691-201ENST00000583764 85 ntBASIC8.19□□□□□ -1.1
VPS8Q8N3P4 AC015660.5-201ENST00000623238 564 ntBASIC8.19□□□□□ -1.1
VPS8Q8N3P4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms