Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 RPL7P45-201ENST00000455851 743 ntBASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC011411.1-201ENST00000509592 876 ntBASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 OR4A17P-201ENST00000526032 904 ntBASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 MIR3176-201ENST00000582210 90 ntBASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AP000864.1-201ENST00000609424 650 ntBASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC109309.2-201ENST00000612597 332 ntBASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC005618.4-201ENST00000625053 554 ntBASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AL359715.3-201ENST00000569267 2123 ntBASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.05□□□□□ -1.6
C9orf40Q8IXQ3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AL353796.1-201ENST00000561542 3241 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 REREP1Y-201ENST00000422655 198 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AL136231.1-201ENST00000429407 730 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 CYCSP6-201ENST00000434498 302 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC099670.2-201ENST00000435130 321 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 NPM1P48-201ENST00000436002 853 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 REREP2Y-201ENST00000439103 200 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC073465.2-201ENST00000440938 498 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 RPL5P25-201ENST00000441148 775 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AL672138.1-201ENST00000450604 1015 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC011225.1-201ENST00000457751 369 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 RPS26P39-201ENST00000469206 341 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC090589.1-201ENST00000473109 362 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC012123.2-201ENST00000485809 248 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 UBA52P7-201ENST00000486088 380 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 RPEP1-201ENST00000504507 658 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 HMGB1P44-201ENST00000508597 572 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC109464.1-201ENST00000511091 819 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 BX510359.5-201ENST00000515651 304 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC007225.2-201ENST00000562529 256 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 RBM22P1-201ENST00000578589 1214 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 MIR4489-201ENST00000578869 62 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 IMMP1LP3-201ENST00000604197 224 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AL139124.1-201ENST00000609123 421 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 AC073869.8-201ENST00000641806 335 ntBASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf40Q8IXQ3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
C9orf40Q8IXQ3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms