Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 H2AFZP6-201ENST00000444403 394 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 SDC4P-201ENST00000453285 601 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC091685.2-201ENST00000454924 864 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 RN7SL352P-201ENST00000466002 277 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL355032.1-201ENST00000472981 438 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 RN7SL860P-201ENST00000473738 223 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 CBX1P5-201ENST00000475330 559 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 PPP1R11P1-201ENST00000486095 376 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC090543.1-201ENST00000492168 485 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC147055.3-201ENST00000510547 851 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC096996.1-201ENST00000563813 325 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL133247.2-201ENST00000603236 482 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL592494.3-201ENST00000609485 464 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL121612.2-201ENST00000612261 482 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC068870.2-201ENST00000620635 389 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC136428.4-201ENST00000634254 1155 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AC016583.1-201ENST00000624221 2431 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AC010132.2-201ENST00000295493 1043 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 RNA5SP211-201ENST00000365516 117 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 CCNB2P1-201ENST00000399411 1150 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AL121835.1-201ENST00000404250 354 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 RPL37P18-201ENST00000411602 243 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 SLC35E1P1-201ENST00000419313 864 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 RPL7L1P9-201ENST00000431298 745 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AC079922.1-201ENST00000443291 359 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 CUBNP2-201ENST00000443534 1139 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AL049829.1-201ENST00000465411 156 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 RPL32P33-201ENST00000487023 394 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 RPL15P21-201ENST00000495592 567 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 RNU6-889P-201ENST00000517189 103 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AC021678.3-201ENST00000517893 476 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 AC090510.2-201ENST00000617465 629 ntBASIC6.28□□□□□ -1.4
HERC6Q8IVU3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.28□□□□□ -1.4
HERC6Q8IVU3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RNU6-1251P-201ENST00000364502 107 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RNA5SP131-201ENST00000365452 119 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms