Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 OR56A4-201ENST00000330728 1209 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 RAB5CP1-201ENST00000395972 580 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 CXADRP1-201ENST00000398098 1095 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AL035405.1-201ENST00000400795 710 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC245060.4-201ENST00000413293 1121 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 MTCO1P57-201ENST00000432182 261 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC138761.5-201ENST00000433967 325 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AP006222.1-205ENST00000450734 457 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC083899.1-201ENST00000454465 3819 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AL356390.1-201ENST00000455684 397 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 ACA64.1-201ENST00000459171 127 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC093827.1-201ENST00000480094 861 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 RPS3AP6-201ENST00000484430 795 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC067773.1-201ENST00000603284 1094 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AL671309.1-201ENST00000603750 544 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 PCA3_2.1-201ENST00000612507 409 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 RN7SL544P-201ENST00000617232 284 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 CXADRP3-202ENST00000617265 1100 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 RN7SL763P-201ENST00000620922 284 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 AC068057.2-201ENST00000624047 895 ntBASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.59□□□□□ -1.51
ZNF549Q6P9A3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ZNF549Q6P9A3 AC099654.3-201ENST00000447087 1546 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 BRAFP1-201ENST00000445336 2703 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 RNU6-819P-201ENST00000364116 107 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 RN7SKP240-201ENST00000410583 375 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 RNF10P1-201ENST00000418589 369 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 VN1R37P-201ENST00000419096 748 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 GAPDHP34-201ENST00000432112 823 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 MAPRE1P3-201ENST00000435438 796 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 NANOGP9-201ENST00000439890 892 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AL596266.1-201ENST00000448132 400 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AL139824.2-201ENST00000458731 1095 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC022215.1-201ENST00000481770 362 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 RPS3AP15-201ENST00000483874 781 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 OR51A1P-201ENST00000511110 946 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 Y_RNA.717-201ENST00000517106 92 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 MRPS16P1-201ENST00000523462 412 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 TOMM20P1-201ENST00000534518 427 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC122688.1-201ENST00000541494 223 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 CD24P2-201ENST00000565486 219 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 AC097065.2-201ENST00000608159 533 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 RNA5SP439-201ENST00000617595 124 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 OR4F13P-202ENST00000560066 2054 ntBASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNF549Q6P9A3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms