Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF43Q68DV7 MIR6806-201ENST00000622141 64 ntBASIC7.15□□□□□ -1.26
RNF43Q68DV7 MIR6503-201ENST00000622884 86 ntBASIC7.15□□□□□ -1.26
RNF43Q68DV7 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF43Q68DV7 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF43Q68DV7 AC073429.2-201ENST00000569694 1444 ntBASIC7.15□□□□□ -1.27
RNF43Q68DV7 AC079949.2-201ENST00000617117 2933 ntBASIC7.15□□□□□ -1.27
RNF43Q68DV7 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 MKI67P1-201ENST00000604297 1460 ntBASIC7.15□□□□□ -1.27
RNF43Q68DV7 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
RNF43Q68DV7 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
RNF43Q68DV7 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 HSPD1P9-201ENST00000420325 1636 ntBASIC7.15□□□□□ -1.27
RNF43Q68DV7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF43Q68DV7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 RNA5SP152-201ENST00000365184 110 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 RNU6-157P-201ENST00000383957 107 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AL353133.1-201ENST00000407695 401 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC007899.1-201ENST00000412776 775 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 RPSAP60-201ENST00000415403 880 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 ATG4AP1-201ENST00000416893 538 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC008173.1-201ENST00000418901 264 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AL109913.1-201ENST00000421173 514 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AL139184.1-202ENST00000422303 222 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC079807.1-201ENST00000429993 481 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 KCTD9P1-201ENST00000430462 1167 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AL389925.1-201ENST00000432257 728 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC242426.1-201ENST00000435270 960 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 Z99127.2-201ENST00000441426 334 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 EEF1E1P1-201ENST00000446998 430 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AL354685.2-201ENST00000448218 1447 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC010878.1-201ENST00000456500 1047 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 PDCL3P4-201ENST00000489621 720 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC096751.1-202ENST00000502691 1067 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC005178.1-201ENST00000508392 440 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 RN7SKP5-201ENST00000517045 272 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 HNRNPCP1-201ENST00000556181 766 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC119501.1-201ENST00000603646 475 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC055876.5-201ENST00000605667 259 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 Y_RNA.804-201ENST00000615262 101 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC012254.5-201ENST00000623573 478 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC073593.1-201ENST00000624500 411 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC105114.1-201ENST00000624795 1862 ntBASIC7.14□□□□□ -1.27
RNF43Q68DV7 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF43Q68DV7 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF43Q68DV7 AC083806.2-201ENST00000617795 2685 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms