Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC092266.1-201ENST00000610958 165 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 uc_338.31-201ENST00000615595 186 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AL121890.2-201ENST00000617644 465 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 CASC19-238ENST00000641523 1558 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AC022417.1-201ENST00000624768 1303 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AP001273.1-201ENST00000624493 3152 ntBASIC4.89□□□□□ -1.63
CCDC58Q4VC31 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC58Q4VC31 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 RNFT1P3-201ENST00000340898 1052 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 OR1L6-202ENST00000373684 1044 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 MIR130B-202ENST00000385018 82 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 RBBP4P5-201ENST00000398583 1266 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AL078599.1-201ENST00000402075 293 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 COX5BP7-201ENST00000414780 274 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC126120.1-201ENST00000431082 470 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 RPL19P16-201ENST00000433839 588 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 GAPDHP59-201ENST00000435908 267 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC009963.3-201ENST00000458090 486 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 RPL32P33-201ENST00000487023 394 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 SNRPCP11-201ENST00000492453 205 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 CDC42P3-201ENST00000518493 633 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC007956.1-201ENST00000555623 542 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 HMGN1P26-201ENST00000558737 303 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC063977.5-201ENST00000601044 974 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 MIR6823-201ENST00000622118 61 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 AL354854.1-201ENST00000455940 1363 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 MTCO1P22-201ENST00000604619 1360 ntBASIC4.88□□□□□ -1.63
CCDC58Q4VC31 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC58Q4VC31 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 THAP12P8-201ENST00000447914 2115 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 CDY11P-201ENST00000447168 1651 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC100778.3-201ENST00000580060 1750 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 RPS3AP15-201ENST00000483874 781 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 GUSBP9-201ENST00000510138 584 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms