Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC007342.8-201ENST00000623278 678 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AL136984.1-201ENST00000607611 1893 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC007996.1-201ENST00000620414 2821 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 RNA5SP27-201ENST00000363839 119 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 MIR130B-202ENST00000385018 82 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 SLC20A1P1-201ENST00000413906 956 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 RPS4XP16-201ENST00000427198 791 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC104843.2-201ENST00000427666 297 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 MTND2P5-201ENST00000432656 1006 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 MTCO1P52-201ENST00000433928 531 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AL353093.1-201ENST00000441292 436 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC073109.1-201ENST00000445066 978 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AL009048.1-201ENST00000450437 298 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AL035407.2-201ENST00000454090 378 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC093719.1-201ENST00000480427 441 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 RPS3AP6-201ENST00000484430 795 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 LRRC6P1-201ENST00000532188 885 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AGGF1P5-201ENST00000567900 919 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 RN7SL622P-201ENST00000585292 275 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC008521.2-201ENST00000591021 259 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC005332.4-201ENST00000592752 579 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AL138960.1-201ENST00000613838 513 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AL359976.1-201ENST00000418655 3528 ntBASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC144BQ3MJ40 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 RNA5SP346-201ENST00000363541 121 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 OR2W4P-201ENST00000406496 926 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 USP9YP21-201ENST00000420603 432 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 ATP5LP2-201ENST00000440646 311 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 HLA-DPA3-207ENST00000454398 229 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 SNORD11.1-201ENST00000459482 85 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 RPL6P9-201ENST00000466502 859 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC098847.1-201ENST00000473094 348 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 RPS27AP16-201ENST00000492222 470 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 RN7SKP265-201ENST00000516448 223 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 RNU6-1028P-201ENST00000517164 93 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 OR5AK3P-201ENST00000527486 1297 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC027455.1-201ENST00000574104 594 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC090616.1-201ENST00000583895 447 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AP001160.4-201ENST00000596971 382 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 CLIC4P2-201ENST00000601934 717 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AL645933.2-201ENST00000606743 1207 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AL157392.4-201ENST00000609756 345 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms