Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
PCDH1Q08174 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PCDH1Q08174 AC093909.5-201ENST00000621839 1799 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PCDH1Q08174 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.86□□□□□ -1.31
PCDH1Q08174 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC016251.2-201ENST00000623393 3089 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 MTCO1P6-201ENST00000481192 1384 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC138915.4-201ENST00000565549 4147 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
PCDH1Q08174 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 OR9G4-201ENST00000302957 984 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 RPL10P16-201ENST00000325000 645 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PCDH1Q08174 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PCDH1Q08174 SNORD115-47-201ENST00000391226 86 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AL139098.1-201ENST00000407291 389 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 RN7SKP254-201ENST00000410685 310 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC002524.1-201ENST00000411687 547 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 GLRXP1-201ENST00000423261 334 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 CYP4F34P-201ENST00000425951 481 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AP003385.1-201ENST00000426387 893 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC000111.3-201ENST00000433478 193 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AL353093.1-201ENST00000441292 436 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AL161626.1-201ENST00000441480 490 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 HMGN1P32-201ENST00000441744 256 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 MTCO1P48-201ENST00000448024 1096 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC079944.1-201ENST00000485426 495 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 RPS4XP23-201ENST00000487801 237 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 TECRP2-201ENST00000503270 928 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC122718.2-201ENST00000505325 591 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 SETP21-201ENST00000514799 892 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.86□□□□□ -1.31
PCDH1Q08174 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC025260.1-201ENST00000548858 430 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC126177.6-201ENST00000550420 1009 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AL049869.4-201ENST00000555669 178 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AL031846.1-201ENST00000560933 314 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC023827.2-201ENST00000566880 1061 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.86□□□□□ -1.31
PCDH1Q08174 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC091304.9-201ENST00000612091 226 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC018558.4-201ENST00000622153 281 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 AC034229.6-201ENST00000623704 224 ntBASIC6.86□□□□□ -1.31
PCDH1Q08174 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
PCDH1Q08174 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
PCDH1Q08174 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH1Q08174 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AL391261.1-201ENST00000555712 1479 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC015871.3-201ENST00000618835 2261 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 AC022819.1-201ENST00000563495 3910 ntBASIC6.85□□□□□ -1.31
PCDH1Q08174 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDH1Q08174 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDH1Q08174 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
PCDH1Q08174 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms