Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 TTC3P1-201ENST00000399586 6081 ntBASIC7.07□□□□□ -1.28
COL16A1Q07092 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.07□□□□□ -1.28
COL16A1Q07092 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.07□□□□□ -1.28
COL16A1Q07092 SNORA70F-201ENST00000384142 135 ntBASIC7.07□□□□□ -1.28
COL16A1Q07092 AC096921.1-201ENST00000411661 375 ntBASIC7.07□□□□□ -1.28
COL16A1Q07092 RNF10P1-201ENST00000418589 369 ntBASIC7.07□□□□□ -1.28
COL16A1Q07092 RPL23AP1-201ENST00000428990 471 ntBASIC7.07□□□□□ -1.28
COL16A1Q07092 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.07□□□□□ -1.28
COL16A1Q07092 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.07□□□□□ -1.28
COL16A1Q07092 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.07□□□□□ -1.28
COL16A1Q07092 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.07□□□□□ -1.28
COL16A1Q07092 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.07□□□□□ -1.28
COL16A1Q07092 OR8B1P-202ENST00000641132 1178 ntBASIC7.07□□□□□ -1.28
COL16A1Q07092 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
COL16A1Q07092 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
COL16A1Q07092 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL16A1Q07092 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.06□□□□□ -1.28
COL16A1Q07092 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL16A1Q07092 SAMMSON-226ENST00000642089 1582 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 AC006511.3-201ENST00000624929 1783 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL16A1Q07092 RNU4-39P-201ENST00000362455 127 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 RNA5SP447-201ENST00000363749 119 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 RNA5SP28-201ENST00000363841 119 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.06□□□□□ -1.28
COL16A1Q07092 SNORD56.6-201ENST00000384569 71 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 MIR129-1-201ENST00000384972 72 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.06□□□□□ -1.28
COL16A1Q07092 RN7SKP92-201ENST00000517266 244 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.06□□□□□ -1.28
COL16A1Q07092 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.06□□□□□ -1.28
COL16A1Q07092 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
COL16A1Q07092 ZNF840P-201ENST00000504759 1996 ntBASIC7.06□□□□□ -1.28
COL16A1Q07092 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL16A1Q07092 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.06□□□□□ -1.28
COL16A1Q07092 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL16A1Q07092 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.06□□□□□ -1.28
COL16A1Q07092 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.06□□□□□ -1.28
COL16A1Q07092 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.06□□□□□ -1.28
COL16A1Q07092 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL16A1Q07092 SNORA66-201ENST00000384792 133 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.05□□□□□ -1.28
COL16A1Q07092 RPL12P34-201ENST00000424532 479 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 CENPIP1-201ENST00000425713 902 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 OR7E125P-201ENST00000443450 846 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.05□□□□□ -1.28
COL16A1Q07092 AL137845.2-201ENST00000444292 988 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 AC109327.1-201ENST00000471666 403 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 AK3P4-201ENST00000504283 583 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC7.05□□□□□ -1.28
COL16A1Q07092 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7.05□□□□□ -1.28
COL16A1Q07092 MORF4L1P3-201ENST00000525966 950 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 OR5M2P-201ENST00000529003 936 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.05□□□□□ -1.28
COL16A1Q07092 NPM1P42-201ENST00000560329 862 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 AC067852.5-201ENST00000589299 310 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 AC105254.2-201ENST00000603636 436 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.05□□□□□ -1.28
COL16A1Q07092 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
COL16A1Q07092 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.05□□□□□ -1.28
COL16A1Q07092 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.05□□□□□ -1.28
COL16A1Q07092 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.05□□□□□ -1.28
COL16A1Q07092 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
COL16A1Q07092 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
COL16A1Q07092 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 AC063976.2-201ENST00000425667 3556 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
COL16A1Q07092 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL16A1Q07092 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
COL16A1Q07092 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL16A1Q07092 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.05□□□□□ -1.28
COL16A1Q07092 HSPA8P15-201ENST00000401676 786 ntBASIC7.05□□□□□ -1.28
COL16A1Q07092 SNORA11F-201ENST00000408237 128 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms