Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.32□□□□□ -1.4
GABPAQ06546 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.32□□□□□ -1.4
GABPAQ06546 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GABPAQ06546 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.32□□□□□ -1.4
GABPAQ06546 SNORA74A-201ENST00000364089 198 ntBASIC6.32□□□□□ -1.4
GABPAQ06546 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GABPAQ06546 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
GABPAQ06546 RN7SKP213-201ENST00000410746 298 ntBASIC6.32□□□□□ -1.4
GABPAQ06546 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.32□□□□□ -1.4
GABPAQ06546 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.32□□□□□ -1.4
GABPAQ06546 RPL7AP6-201ENST00000477943 801 ntBASIC6.32□□□□□ -1.4
GABPAQ06546 SCARNA20.4-201ENST00000516969 131 ntBASIC6.32□□□□□ -1.4
GABPAQ06546 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
GABPAQ06546 AC084824.2-201ENST00000548906 345 ntBASIC6.32□□□□□ -1.4
GABPAQ06546 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.32□□□□□ -1.4
GABPAQ06546 RN7SL708P-201ENST00000580952 299 ntBASIC6.32□□□□□ -1.4
GABPAQ06546 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.32□□□□□ -1.4
GABPAQ06546 AL139041.1-201ENST00000605480 610 ntBASIC6.32□□□□□ -1.4
GABPAQ06546 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
GABPAQ06546 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
GABPAQ06546 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
GABPAQ06546 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GABPAQ06546 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.32□□□□□ -1.4
GABPAQ06546 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GABPAQ06546 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.32□□□□□ -1.4
GABPAQ06546 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
GABPAQ06546 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.31□□□□□ -1.4
GABPAQ06546 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.31□□□□□ -1.4
GABPAQ06546 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.31□□□□□ -1.4
GABPAQ06546 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 SNORA17.1-201ENST00000362945 126 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.31□□□□□ -1.4
GABPAQ06546 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.31□□□□□ -1.4
GABPAQ06546 RN7SL610P-201ENST00000463845 291 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 CBX1P5-201ENST00000475330 559 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 USP9YP2-201ENST00000504503 1000 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.31□□□□□ -1.4
GABPAQ06546 USP9YP1-201ENST00000513521 1002 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.31□□□□□ -1.4
GABPAQ06546 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.31□□□□□ -1.4
GABPAQ06546 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.31□□□□□ -1.4
GABPAQ06546 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.31□□□□□ -1.4
GABPAQ06546 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.31□□□□□ -1.4
GABPAQ06546 AP001357.1-201ENST00000586304 1053 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.31□□□□□ -1.4
GABPAQ06546 AF117829.2-201ENST00000619538 361 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 CASC19-222ENST00000641321 1173 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 AC100757.1-201ENST00000616872 1835 ntBASIC6.31□□□□□ -1.4
GABPAQ06546 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.31□□□□□ -1.4
GABPAQ06546 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.31□□□□□ -1.4
GABPAQ06546 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.31□□□□□ -1.4
GABPAQ06546 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.31□□□□□ -1.4
GABPAQ06546 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.31□□□□□ -1.4
GABPAQ06546 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GABPAQ06546 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
GABPAQ06546 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GABPAQ06546 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GABPAQ06546 PANDAR-201ENST00000629595 1506 ntBASIC6.3□□□□□ -1.4
GABPAQ06546 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.3□□□□□ -1.4
GABPAQ06546 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GABPAQ06546 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
GABPAQ06546 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
GABPAQ06546 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GABPAQ06546 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.3□□□□□ -1.4
GABPAQ06546 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.3□□□□□ -1.4
GABPAQ06546 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.3□□□□□ -1.4
GABPAQ06546 AC073465.2-201ENST00000440938 498 ntBASIC6.3□□□□□ -1.4
GABPAQ06546 RPS11P7-201ENST00000442125 465 ntBASIC6.3□□□□□ -1.4
GABPAQ06546 RN7SL423P-201ENST00000486202 304 ntBASIC6.3□□□□□ -1.4
GABPAQ06546 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.3□□□□□ -1.4
GABPAQ06546 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.3□□□□□ -1.4
GABPAQ06546 AC134349.2-201ENST00000535136 910 ntBASIC6.3□□□□□ -1.4
GABPAQ06546 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.3□□□□□ -1.4
GABPAQ06546 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.3□□□□□ -1.4
GABPAQ06546 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.3□□□□□ -1.4
GABPAQ06546 AC087763.1-201ENST00000603391 286 ntBASIC6.3□□□□□ -1.4
GABPAQ06546 MIR6730-201ENST00000622213 67 ntBASIC6.3□□□□□ -1.4
GABPAQ06546 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.3□□□□□ -1.4
GABPAQ06546 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GABPAQ06546 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.3□□□□□ -1.4
GABPAQ06546 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
GABPAQ06546 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.3□□□□□ -1.4
GABPAQ06546 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
GABPAQ06546 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GABPAQ06546 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.29□□□□□ -1.4
GABPAQ06546 AC114774.1-201ENST00000507410 1770 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
GABPAQ06546 U3.3-201ENST00000362986 216 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 MIR937-201ENST00000401271 86 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 PPIAP9-201ENST00000403866 498 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms