Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP1Q04837 AC020890.1-201ENST00000491837 504 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 HMGB1P44-201ENST00000508597 572 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP1Q04837 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP1Q04837 AC006427.1-201ENST00000514359 712 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 RN7SKP238-201ENST00000516483 249 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 MRPS16P1-201ENST00000523462 412 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SSBP1Q04837 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP1Q04837 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP1Q04837 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP1Q04837 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SSBP1Q04837 AC005252.1-201ENST00000604518 1063 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 AC012511.1-201ENST00000608140 449 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP1Q04837 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP1Q04837 RN7SL544P-201ENST00000617232 284 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 RN7SL763P-201ENST00000620922 284 ntBASIC4.47□□□□□ -1.69
SSBP1Q04837 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SSBP1Q04837 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP1Q04837 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP1Q04837 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP1Q04837 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SSBP1Q04837 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP1Q04837 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP1Q04837 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP1Q04837 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.46□□□□□ -1.69
SSBP1Q04837 AC089998.1-201ENST00000548575 3141 ntBASIC4.46□□□□□ -1.69
SSBP1Q04837 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP1Q04837 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SSBP1Q04837 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
SSBP1Q04837 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 AL390316.1-201ENST00000406279 553 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP1Q04837 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.46□□□□□ -1.7
SSBP1Q04837 HMGB3P24-201ENST00000433260 622 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SSBP1Q04837 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP1Q04837 PNKDP1-201ENST00000435914 430 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 ATP5LP2-201ENST00000440646 311 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP1Q04837 PPIAP27-201ENST00000453800 265 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SSBP1Q04837 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 ASNSP4-201ENST00000511103 447 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP1Q04837 ENPP7P9-201ENST00000514456 627 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 RNA5SP249-201ENST00000516127 99 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 SCARNA16.4-201ENST00000516956 187 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP1Q04837 HNRNPRP2-201ENST00000528421 743 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SSBP1Q04837 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.46□□□□□ -1.7
SSBP1Q04837 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP1Q04837 IGBP1P1-201ENST00000554337 1009 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP1Q04837 DPPA2P4-201ENST00000563717 878 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP1Q04837 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 PPATP2-201ENST00000605635 508 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.46□□□□□ -1.7
SSBP1Q04837 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP1Q04837 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP1Q04837 AP000542.2-201ENST00000623199 6179 ntBASIC4.46□□□□□ -1.7
SSBP1Q04837 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.46□□□□□ -1.7
SSBP1Q04837 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.46□□□□□ -1.7
SSBP1Q04837 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP1Q04837 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP1Q04837 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SSBP1Q04837 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP1Q04837 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.45□□□□□ -1.7
SSBP1Q04837 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP1Q04837 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP1Q04837 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.45□□□□□ -1.7
SSBP1Q04837 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP1Q04837 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SSBP1Q04837 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP1Q04837 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 RBBP4P5-201ENST00000398583 1266 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 AP000580.1-201ENST00000404439 358 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 RMRPP5-201ENST00000411156 267 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP1Q04837 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.45□□□□□ -1.7
SSBP1Q04837 COX6CP13-201ENST00000428703 226 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 LINC00328-2P-201ENST00000436585 219 ntBASIC4.45□□□□□ -1.7
SSBP1Q04837 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms