Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNA1P78396 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCNA1P78396 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNA1P78396 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCNA1P78396 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCNA1P78396 RNA5SP487-201ENST00000410186 122 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 Y_RNA.625-201ENST00000411256 107 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 RN7SKP279-201ENST00000411383 298 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNA1P78396 AC007161.1-204ENST00000423039 460 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNA1P78396 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNA1P78396 NANOGP9-201ENST00000439890 892 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNA1P78396 RSU1P1-201ENST00000453416 441 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNA1P78396 AC012123.2-201ENST00000485809 248 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 AC092593.2-201ENST00000513866 913 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNA1P78396 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNA1P78396 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.29□□□□□ -1.4
CCNA1P78396 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.29□□□□□ -1.4
CCNA1P78396 AC007159.1-201ENST00000566529 4706 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNA1P78396 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNA1P78396 AC125494.2-201ENST00000602431 657 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 AC104785.1-201ENST00000603220 588 ntBASIC6.29□□□□□ -1.4
CCNA1P78396 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNA1P78396 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNA1P78396 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCNA1P78396 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNA1P78396 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNA1P78396 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNA1P78396 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
CCNA1P78396 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.28□□□□□ -1.4
CCNA1P78396 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
CCNA1P78396 AC114947.2-201ENST00000565748 2125 ntBASIC6.28□□□□□ -1.4
CCNA1P78396 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.28□□□□□ -1.4
CCNA1P78396 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.28□□□□□ -1.4
CCNA1P78396 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCNA1P78396 RN7SKP103-201ENST00000363848 320 ntBASIC6.28□□□□□ -1.4
CCNA1P78396 AC093162.1-201ENST00000419682 124 ntBASIC6.28□□□□□ -1.4
CCNA1P78396 RPS3AP38-201ENST00000435889 763 ntBASIC6.28□□□□□ -1.4
CCNA1P78396 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.28□□□□□ -1.4
CCNA1P78396 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.28□□□□□ -1.4
CCNA1P78396 SUMO2P19-201ENST00000518920 295 ntBASIC6.28□□□□□ -1.4
CCNA1P78396 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.28□□□□□ -1.4
CCNA1P78396 AL390726.5-202ENST00000564800 256 ntBASIC6.28□□□□□ -1.4
CCNA1P78396 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.28□□□□□ -1.4
CCNA1P78396 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.28□□□□□ -1.4
CCNA1P78396 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.28□□□□□ -1.4
CCNA1P78396 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CCNA1P78396 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCNA1P78396 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CCNA1P78396 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNA1P78396 HSPD1P8-201ENST00000400121 1658 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCNA1P78396 OR55B1P-203ENST00000641518 2602 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 SNORA17.1-201ENST00000362945 126 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 AL050305.1-201ENST00000399993 1230 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.27□□□□□ -1.41
CCNA1P78396 RPL12P17-201ENST00000432393 498 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.27□□□□□ -1.41
CCNA1P78396 AC006466.1-201ENST00000438721 289 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 AL390879.1-201ENST00000439143 386 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 RPL7P6-201ENST00000480903 738 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.27□□□□□ -1.41
CCNA1P78396 AP001922.4-201ENST00000526967 290 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 OR11J2P-201ENST00000555298 907 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 RPL10P14-201ENST00000565265 298 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.27□□□□□ -1.41
CCNA1P78396 AC005341.1-201ENST00000571086 708 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 MIR4436B2-201ENST00000581415 91 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 MIR4436B1-201ENST00000583272 91 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 AC090527.3-201ENST00000619041 548 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.27□□□□□ -1.41
CCNA1P78396 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.27□□□□□ -1.41
CCNA1P78396 LINC01739-205ENST00000641890 573 ntBASIC6.27□□□□□ -1.41
CCNA1P78396 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CCNA1P78396 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCNA1P78396 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCNA1P78396 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCNA1P78396 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCNA1P78396 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCNA1P78396 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CCNA1P78396 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.26□□□□□ -1.41
CCNA1P78396 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCNA1P78396 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms