Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NEPNP-201ENST00000404786 1371 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 PDZK1P1-202ENST00000425209 1350 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN20P56880 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CLDN20P56880 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 SNORD115-48-201ENST00000364764 76 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 NACAP7-201ENST00000407371 609 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 AC245060.4-201ENST00000413293 1121 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 MTND4P24-201ENST00000424002 397 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN20P56880 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN20P56880 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN20P56880 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN20P56880 AC023271.1-201ENST00000445936 1090 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 AL603882.1-201ENST00000463059 681 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 RN7SL197P-201ENST00000466981 299 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 UBFD1P1-201ENST00000473259 814 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 RPL38P3-201ENST00000484463 213 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 AC104629.1-201ENST00000494226 508 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 RPSAP51-201ENST00000497462 645 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN20P56880 PSMA2P2-201ENST00000504319 686 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN20P56880 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN20P56880 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN20P56880 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 AL121839.1-201ENST00000556233 1185 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN20P56880 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 COX6CP7-201ENST00000597056 208 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 AL583832.1-201ENST00000603227 784 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN20P56880 AC145423.1-201ENST00000605712 336 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 AL139099.4-201ENST00000614802 114 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 AP005431.1-201ENST00000618479 319 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 OR8G3P-202ENST00000641572 1255 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 AC002525.1-201ENST00000624392 1622 ntBASIC5.29□□□□□ -1.56
CLDN20P56880 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN20P56880 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CLDN20P56880 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN20P56880 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
CLDN20P56880 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN20P56880 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLDN20P56880 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLDN20P56880 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 MAPK10-328ENST00000641553 4009 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN20P56880 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 RN7SKP29-201ENST00000410957 272 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 MRPL53P1-201ENST00000414323 319 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 GTF3AP1-201ENST00000416942 1004 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN20P56880 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN20P56880 AL136231.1-201ENST00000429407 730 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AL389925.1-201ENST00000432257 728 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN20P56880 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN20P56880 SUMO2P1-206ENST00000445436 284 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 AL358876.1-201ENST00000453364 1075 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AP000547.1-201ENST00000454360 617 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 EIF2S2P4-201ENST00000461070 984 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AL157777.1-201ENST00000468100 304 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN20P56880 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 AC015908.1-201ENST00000478739 476 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN20P56880 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN20P56880 PDCL3P4-201ENST00000489621 720 ntBASIC5.28□□□□□ -1.56
CLDN20P56880 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN20P56880 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN20P56880 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN20P56880 GLUD1P3-202ENST00000508551 200 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms