Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.49□□□□□ -1.53
PDX1P52945 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.49□□□□□ -1.53
PDX1P52945 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.49□□□□□ -1.53
PDX1P52945 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.48□□□□□ -1.53
PDX1P52945 KYNUP3-201ENST00000574386 1341 ntBASIC5.48□□□□□ -1.53
PDX1P52945 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 CDY11P-201ENST00000447168 1651 ntBASIC5.48□□□□□ -1.53
PDX1P52945 RNA5SP30-201ENST00000365552 115 ntBASIC5.48□□□□□ -1.53
PDX1P52945 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.48□□□□□ -1.53
PDX1P52945 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.48□□□□□ -1.53
PDX1P52945 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 CYCSP12-201ENST00000437729 300 ntBASIC5.48□□□□□ -1.53
PDX1P52945 AC019185.1-201ENST00000442718 389 ntBASIC5.48□□□□□ -1.53
PDX1P52945 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 EEF1B2P5-201ENST00000444820 548 ntBASIC5.48□□□□□ -1.53
PDX1P52945 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.48□□□□□ -1.53
PDX1P52945 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 TAAR4P-201ENST00000454843 1039 ntBASIC5.48□□□□□ -1.53
PDX1P52945 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 RN7SL570P-201ENST00000484405 292 ntBASIC5.48□□□□□ -1.53
PDX1P52945 NDUFA5P12-201ENST00000503796 343 ntBASIC5.48□□□□□ -1.53
PDX1P52945 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 MIR2117-201ENST00000516780 80 ntBASIC5.48□□□□□ -1.53
PDX1P52945 AC078899.1-201ENST00000521432 1185 ntBASIC5.48□□□□□ -1.53
PDX1P52945 AP003168.1-201ENST00000530091 307 ntBASIC5.48□□□□□ -1.53
PDX1P52945 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 MRPS21P7-201ENST00000566937 238 ntBASIC5.48□□□□□ -1.53
PDX1P52945 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.48□□□□□ -1.53
PDX1P52945 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 AC020915.5-201ENST00000596836 964 ntBASIC5.48□□□□□ -1.53
PDX1P52945 MIR6837-201ENST00000620884 64 ntBASIC5.48□□□□□ -1.53
PDX1P52945 AC136428.4-201ENST00000634254 1155 ntBASIC5.48□□□□□ -1.53
PDX1P52945 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
PDX1P52945 AC007342.5-201ENST00000571340 2142 ntBASIC5.48□□□□□ -1.53
PDX1P52945 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDX1P52945 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
PDX1P52945 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDX1P52945 FBXL21-201ENST00000297158 1305 ntBASIC5.48□□□□□ -1.53
PDX1P52945 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.47□□□□□ -1.53
PDX1P52945 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.47□□□□□ -1.53
PDX1P52945 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDX1P52945 MT-RNR1-201ENST00000389680 954 ntBASIC5.47□□□□□ -1.53
PDX1P52945 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.47□□□□□ -1.53
PDX1P52945 RNU6-564P-201ENST00000410983 104 ntBASIC5.47□□□□□ -1.53
PDX1P52945 RN7SKP273-201ENST00000411392 314 ntBASIC5.47□□□□□ -1.53
PDX1P52945 NIFKP3-201ENST00000417799 865 ntBASIC5.47□□□□□ -1.53
PDX1P52945 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.47□□□□□ -1.53
PDX1P52945 AL139148.1-201ENST00000427122 680 ntBASIC5.47□□□□□ -1.53
PDX1P52945 AC114878.1-201ENST00000441166 358 ntBASIC5.47□□□□□ -1.53
PDX1P52945 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDX1P52945 OTX2P1-201ENST00000450956 354 ntBASIC5.47□□□□□ -1.53
PDX1P52945 AP000547.1-201ENST00000454360 617 ntBASIC5.47□□□□□ -1.53
PDX1P52945 OR2AO1P-201ENST00000476497 403 ntBASIC5.47□□□□□ -1.53
PDX1P52945 AC079080.1-201ENST00000479841 822 ntBASIC5.47□□□□□ -1.53
PDX1P52945 RPS4XP1-201ENST00000482189 787 ntBASIC5.47□□□□□ -1.53
PDX1P52945 RN7SL30P-201ENST00000488416 306 ntBASIC5.47□□□□□ -1.53
PDX1P52945 AC231760.1-201ENST00000498002 260 ntBASIC5.47□□□□□ -1.53
PDX1P52945 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.47□□□□□ -1.53
PDX1P52945 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.47□□□□□ -1.53
PDX1P52945 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.47□□□□□ -1.53
PDX1P52945 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.47□□□□□ -1.53
PDX1P52945 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.47□□□□□ -1.53
PDX1P52945 OR4A46P-201ENST00000527255 933 ntBASIC5.47□□□□□ -1.53
PDX1P52945 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.47□□□□□ -1.53
PDX1P52945 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.47□□□□□ -1.53
PDX1P52945 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.47□□□□□ -1.53
PDX1P52945 KATNBL1P1-201ENST00000605192 748 ntBASIC5.47□□□□□ -1.53
PDX1P52945 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.47□□□□□ -1.53
PDX1P52945 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDX1P52945 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms