Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
SMARCA4P51532 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SMARCA4P51532 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.32□□□□□ -0.92
SMARCA4P51532 HNRNPA1P54-201ENST00000411857 9714 ntBASIC9.32□□□□□ -0.92
SMARCA4P51532 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC9.32□□□□□ -0.92
SMARCA4P51532 RPS27AP7-201ENST00000422792 455 ntBASIC9.32□□□□□ -0.92
SMARCA4P51532 NOP56P2-201ENST00000447491 769 ntBASIC9.32□□□□□ -0.92
SMARCA4P51532 OR52J1P-201ENST00000450596 932 ntBASIC9.32□□□□□ -0.92
SMARCA4P51532 RN7SL814P-201ENST00000487715 300 ntBASIC9.32□□□□□ -0.92
SMARCA4P51532 TEX41-238ENST00000604253 709 ntTSL 5 BASIC9.32□□□□□ -0.92
SMARCA4P51532 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SMARCA4P51532 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SMARCA4P51532 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
SMARCA4P51532 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SMARCA4P51532 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SMARCA4P51532 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SMARCA4P51532 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC9.32□□□□□ -0.92
SMARCA4P51532 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SMARCA4P51532 AC007064.3-201ENST00000422608 359 ntBASIC9.31□□□□□ -0.92
SMARCA4P51532 AC124944.2-201ENST00000429866 1242 ntBASIC9.31□□□□□ -0.92
SMARCA4P51532 NDUFAF4P2-201ENST00000445374 520 ntBASIC9.31□□□□□ -0.92
SMARCA4P51532 AL161747.1-201ENST00000480068 358 ntBASIC9.31□□□□□ -0.92
SMARCA4P51532 RPL7P40-201ENST00000481703 745 ntBASIC9.31□□□□□ -0.92
SMARCA4P51532 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC9.31□□□□□ -0.92
SMARCA4P51532 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC9.31□□□□□ -0.92
SMARCA4P51532 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC9.31□□□□□ -0.92
SMARCA4P51532 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
SMARCA4P51532 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SMARCA4P51532 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
SMARCA4P51532 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SMARCA4P51532 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SMARCA4P51532 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC9.31□□□□□ -0.92
SMARCA4P51532 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC9.31□□□□□ -0.92
SMARCA4P51532 RNA5SP191-201ENST00000362585 102 ntBASIC9.31□□□□□ -0.92
SMARCA4P51532 RSL24D1P6-201ENST00000426934 401 ntBASIC9.31□□□□□ -0.92
SMARCA4P51532 AC108738.1-201ENST00000603703 237 ntBASIC9.31□□□□□ -0.92
SMARCA4P51532 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SMARCA4P51532 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SMARCA4P51532 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
SMARCA4P51532 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC9.3□□□□□ -0.92
SMARCA4P51532 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SMARCA4P51532 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SMARCA4P51532 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SMARCA4P51532 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
SMARCA4P51532 AC068769.1-201ENST00000474767 2426 ntBASIC9.3□□□□□ -0.92
SMARCA4P51532 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SMARCA4P51532 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SMARCA4P51532 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC9.3□□□□□ -0.92
SMARCA4P51532 RPS29P10-201ENST00000439197 166 ntBASIC9.3□□□□□ -0.92
SMARCA4P51532 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC9.3□□□□□ -0.92
SMARCA4P51532 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC9.3□□□□□ -0.92
SMARCA4P51532 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC9.3□□□□□ -0.92
SMARCA4P51532 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC9.3□□□□□ -0.92
SMARCA4P51532 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC9.3□□□□□ -0.92
SMARCA4P51532 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9.3□□□□□ -0.92
SMARCA4P51532 AL162431.4-201ENST00000604674 411 ntBASIC9.3□□□□□ -0.92
SMARCA4P51532 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC9.3□□□□□ -0.92
SMARCA4P51532 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC9.3□□□□□ -0.92
SMARCA4P51532 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.3□□□□□ -0.92
SMARCA4P51532 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SMARCA4P51532 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SMARCA4P51532 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SMARCA4P51532 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
SMARCA4P51532 RPS16P5-201ENST00000406501 404 ntBASIC9.29□□□□□ -0.92
SMARCA4P51532 CHIAP3-201ENST00000423668 1133 ntBASIC9.29□□□□□ -0.92
SMARCA4P51532 AC011005.3-201ENST00000491624 395 ntBASIC9.29□□□□□ -0.92
SMARCA4P51532 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC9.29□□□□□ -0.92
SMARCA4P51532 AC105129.1-201ENST00000560250 297 ntBASIC9.29□□□□□ -0.92
SMARCA4P51532 AL034374.2-201ENST00000605281 548 ntBASIC9.29□□□□□ -0.92
SMARCA4P51532 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC9.29□□□□□ -0.92
SMARCA4P51532 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC9.29□□□□□ -0.92
SMARCA4P51532 AC135068.12-201ENST00000637370 931 ntBASIC9.29□□□□□ -0.92
SMARCA4P51532 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
SMARCA4P51532 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SMARCA4P51532 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SMARCA4P51532 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SMARCA4P51532 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC9.28□□□□□ -0.92
SMARCA4P51532 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SMARCA4P51532 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SMARCA4P51532 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SMARCA4P51532 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SMARCA4P51532 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC9.28□□□□□ -0.92
SMARCA4P51532 RNA5SP479-201ENST00000364858 117 ntBASIC9.28□□□□□ -0.92
SMARCA4P51532 GTF2IP5-201ENST00000414608 731 ntBASIC9.28□□□□□ -0.92
SMARCA4P51532 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC9.28□□□□□ -0.92
SMARCA4P51532 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC9.28□□□□□ -0.92
SMARCA4P51532 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC9.28□□□□□ -0.92
SMARCA4P51532 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC9.28□□□□□ -0.92
SMARCA4P51532 AL137845.2-201ENST00000444292 988 ntBASIC9.28□□□□□ -0.92
SMARCA4P51532 MORF4L1P3-201ENST00000525966 950 ntBASIC9.28□□□□□ -0.92
SMARCA4P51532 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC9.28□□□□□ -0.92
SMARCA4P51532 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SMARCA4P51532 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC9.28□□□□□ -0.92
SMARCA4P51532 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SMARCA4P51532 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC9.28□□□□□ -0.92
SMARCA4P51532 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SMARCA4P51532 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC9.28□□□□□ -0.92
SMARCA4P51532 AC079097.1-201ENST00000512187 1399 ntBASIC9.28□□□□□ -0.92
SMARCA4P51532 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC9.27□□□□□ -0.92
SMARCA4P51532 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms