Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 OR5H7P-201ENST00000514084 930 ntBASIC7.06□□□□□ -1.28
LIG3P49916 AC096661.1-201ENST00000515870 822 ntBASIC7.06□□□□□ -1.28
LIG3P49916 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.06□□□□□ -1.28
LIG3P49916 OR4A6P-201ENST00000534364 970 ntBASIC7.06□□□□□ -1.28
LIG3P49916 AC092851.1-201ENST00000535964 478 ntBASIC7.06□□□□□ -1.28
LIG3P49916 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG3P49916 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.06□□□□□ -1.28
LIG3P49916 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG3P49916 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.06□□□□□ -1.28
LIG3P49916 AL109628.1-201ENST00000556877 366 ntBASIC7.06□□□□□ -1.28
LIG3P49916 AC044913.1-201ENST00000557200 430 ntBASIC7.06□□□□□ -1.28
LIG3P49916 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG3P49916 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.06□□□□□ -1.28
LIG3P49916 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
LIG3P49916 AC096708.2-201ENST00000577676 512 ntBASIC7.06□□□□□ -1.28
LIG3P49916 MIR3135A-201ENST00000578460 77 ntBASIC7.06□□□□□ -1.28
LIG3P49916 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG3P49916 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG3P49916 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG3P49916 AC073544.2-201ENST00000601155 540 ntBASIC7.06□□□□□ -1.28
LIG3P49916 AL356121.2-201ENST00000624715 780 ntBASIC7.06□□□□□ -1.28
LIG3P49916 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG3P49916 AC087821.2-201ENST00000637086 450 ntBASIC7.06□□□□□ -1.28
LIG3P49916 AL354702.2-202ENST00000641481 890 ntBASIC7.06□□□□□ -1.28
LIG3P49916 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG3P49916 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LIG3P49916 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.06□□□□□ -1.28
LIG3P49916 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LIG3P49916 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
LIG3P49916 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG3P49916 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LIG3P49916 OR5M2P-202ENST00000641241 4242 ntBASIC7.06□□□□□ -1.28
LIG3P49916 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
LIG3P49916 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
LIG3P49916 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG3P49916 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
LIG3P49916 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 ATP5BP1-201ENST00000411980 1574 ntBASIC7.05□□□□□ -1.28
LIG3P49916 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 AC092111.2-201ENST00000611627 1414 ntBASIC7.05□□□□□ -1.28
LIG3P49916 CASC19-206ENST00000641028 1430 ntBASIC7.05□□□□□ -1.28
LIG3P49916 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG3P49916 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
LIG3P49916 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 SNORA70.9-201ENST00000384370 135 ntBASIC7.05□□□□□ -1.28
LIG3P49916 RN7SKP62-201ENST00000384539 329 ntBASIC7.05□□□□□ -1.28
LIG3P49916 MIR541-201ENST00000401360 84 ntBASIC7.05□□□□□ -1.28
LIG3P49916 RN7SKP273-201ENST00000411392 314 ntBASIC7.05□□□□□ -1.28
LIG3P49916 CBX1P3-201ENST00000413296 527 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AL590806.1-201ENST00000415818 853 ntBASIC7.05□□□□□ -1.28
LIG3P49916 NPM1P11-201ENST00000417106 855 ntBASIC7.05□□□□□ -1.28
LIG3P49916 MTCYBP5-201ENST00000423752 1135 ntBASIC7.05□□□□□ -1.28
LIG3P49916 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG3P49916 AL121916.1-201ENST00000429405 308 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG3P49916 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG3P49916 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG3P49916 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG3P49916 AC009518.3-201ENST00000438972 253 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG3P49916 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 RPL23AP76-201ENST00000441860 458 ntBASIC7.05□□□□□ -1.28
LIG3P49916 SDHCP3-201ENST00000445371 506 ntBASIC7.05□□□□□ -1.28
LIG3P49916 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG3P49916 NPM1P49-201ENST00000448027 714 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.05□□□□□ -1.28
LIG3P49916 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG3P49916 NDUFAF4P4-201ENST00000454883 502 ntBASIC7.05□□□□□ -1.28
LIG3P49916 SRRM1P2-201ENST00000464531 1192 ntBASIC7.05□□□□□ -1.28
LIG3P49916 RN7SL868P-201ENST00000485915 303 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AP005202.1-201ENST00000489915 867 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AC073358.1-201ENST00000505671 684 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG3P49916 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG3P49916 AC008868.1-201ENST00000509786 737 ntBASIC7.05□□□□□ -1.28
LIG3P49916 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG3P49916 NPM1P21-201ENST00000513394 762 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG3P49916 NDUFA5P2-201ENST00000519723 344 ntBASIC7.05□□□□□ -1.28
LIG3P49916 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG3P49916 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.05□□□□□ -1.28
LIG3P49916 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 EIF4A3P1-201ENST00000578499 647 ntBASIC7.05□□□□□ -1.28
LIG3P49916 MIR4428-201ENST00000584884 73 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.05□□□□□ -1.28
LIG3P49916 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 AP000238.1-201ENST00000608759 426 ntBASIC7.05□□□□□ -1.28
LIG3P49916 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AC005332.10-201ENST00000612725 619 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AC116165.2-201ENST00000616705 206 ntBASIC7.05□□□□□ -1.28
LIG3P49916 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.05□□□□□ -1.28
LIG3P49916 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 AL049541.2-201ENST00000626377 555 ntBASIC7.05□□□□□ -1.28
LIG3P49916 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LIG3P49916 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
LIG3P49916 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms