Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CX3CR1P49238 OR7E25P-201ENST00000344844 931 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CR1P49238 AL672167.2-201ENST00000377164 879 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 HMGB1P20-201ENST00000402555 677 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 VN1R12P-201ENST00000403778 876 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CR1P49238 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CR1P49238 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CR1P49238 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
CX3CR1P49238 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CR1P49238 AC115283.1-201ENST00000427353 400 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 SERPINA7P1-201ENST00000443077 631 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CR1P49238 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CR1P49238 OR52Y1P-201ENST00000452418 828 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AL358876.1-201ENST00000453364 1075 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AC011476.1-201ENST00000466725 307 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CR1P49238 RN7SL583P-201ENST00000475692 287 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 COX6B1P2-201ENST00000489624 230 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CR1P49238 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.84□□□□□ -1.63
CX3CR1P49238 RNU6-615P-201ENST00000516065 106 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 RNA5SP271-201ENST00000516700 88 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 SEPT10P1-201ENST00000517342 1162 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.84□□□□□ -1.63
CX3CR1P49238 AC079064.1-201ENST00000528365 362 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AC079600.1-201ENST00000550326 297 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AC135626.1-201ENST00000556983 435 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CR1P49238 MIR4271-201ENST00000582451 67 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 MIR7853-201ENST00000584820 132 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.84□□□□□ -1.63
CX3CR1P49238 AC025574.2-201ENST00000615621 514 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 AP003400.2-201ENST00000624036 666 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.84□□□□□ -1.63
CX3CR1P49238 AC129915.3-201ENST00000634128 948 ntBASIC4.84□□□□□ -1.63
CX3CR1P49238 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.84□□□□□ -1.64
CX3CR1P49238 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CX3CR1P49238 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CX3CR1P49238 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CX3CR1P49238 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CX3CR1P49238 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.83□□□□□ -1.64
CX3CR1P49238 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.83□□□□□ -1.64
CX3CR1P49238 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC112255.1-201ENST00000624070 2493 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CX3CR1P49238 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC106872.5-201ENST00000508856 1416 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC008079.2-201ENST00000623543 20396 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CX3CR1P49238 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CX3CR1P49238 OR52B3P-201ENST00000314715 928 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 MIR137-201ENST00000385223 102 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CX3CR1P49238 RN7SKP240-201ENST00000410583 375 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 HYALP1-201ENST00000417674 1279 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AL121878.1-201ENST00000418638 859 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AC113412.1-201ENST00000425840 504 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CR1P49238 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CX3CR1P49238 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.83□□□□□ -1.64
CX3CR1P49238 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC024405.1-201ENST00000532521 1042 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.83□□□□□ -1.64
CX3CR1P49238 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CR1P49238 IGBP1P1-201ENST00000554337 1009 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CR1P49238 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AP001496.3-201ENST00000580230 913 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AP002884.5-201ENST00000595053 1132 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CR1P49238 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AL356608.1-201ENST00000610034 820 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AL159169.2-201ENST00000610061 1269 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AC010632.3-201ENST00000611377 369 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CR1P49238 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CR1P49238 SRRM1P3-201ENST00000426911 2678 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC068870.3-201ENST00000625077 2536 ntBASIC4.83□□□□□ -1.64
CX3CR1P49238 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms