Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSNK1A1P48729 SDHDP6-201ENST00000414693 480 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 VN1R3-201ENST00000418822 919 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 AL034379.1-201ENST00000423216 253 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 MTND6P12-201ENST00000428247 522 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 FMO7P-201ENST00000436045 768 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 SUMO2P3-201ENST00000438311 288 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 AL359265.1-201ENST00000440296 795 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC073465.2-201ENST00000440938 498 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 RN7SL72P-201ENST00000460697 269 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC138866.2-201ENST00000508650 584 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC090568.1-201ENST00000509499 856 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 TRIM51DP-201ENST00000529746 596 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSNK1A1P48729 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC015982.1-201ENST00000608113 465 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSNK1A1P48729 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSNK1A1P48729 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSNK1A1P48729 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC004158.1-201ENST00000564508 4319 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSNK1A1P48729 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSNK1A1P48729 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.91□□□□□ -1.62
CSNK1A1P48729 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CSNK1A1P48729 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CSNK1A1P48729 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.9□□□□□ -1.62
CSNK1A1P48729 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.9□□□□□ -1.62
CSNK1A1P48729 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 AL353796.1-201ENST00000561542 3241 ntBASIC4.9□□□□□ -1.62
CSNK1A1P48729 AC245100.2-201ENST00000454544 1679 ntBASIC4.9□□□□□ -1.62
CSNK1A1P48729 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSNK1A1P48729 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CSNK1A1P48729 RN7SKP6-201ENST00000364795 319 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 RNU4-2-201ENST00000365668 141 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 SNORA70.6-201ENST00000383934 134 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AL133482.1-201ENST00000415988 498 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC234781.4-201ENST00000419384 244 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC007161.1-204ENST00000423039 460 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 TNPO1P1-201ENST00000423641 1138 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CSNK1A1P48729 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 OR6D1P-201ENST00000436165 939 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 MTND2P40-201ENST00000436718 841 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC002504.1-201ENST00000438281 691 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC064862.4-201ENST00000442180 334 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC092106.1-201ENST00000444291 373 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 RPL31P15-201ENST00000449770 338 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AL450023.1-201ENST00000450868 751 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AZGP1P2-201ENST00000454506 345 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 NRBF2P4-201ENST00000520874 850 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC010547.7-201ENST00000570323 333 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC019322.1-201ENST00000571869 389 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC027216.1-201ENST00000577726 685 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 AC012616.1-201ENST00000600294 197 ntBASIC4.9□□□□□ -1.63
CSNK1A1P48729 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.9□□□□□ -1.63
CSNK1A1P48729 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms