Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.06□□□□□ -1.6
SHC1P29353 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHC1P29353 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHC1P29353 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.05□□□□□ -1.6
SHC1P29353 AC005005.4-201ENST00000623789 16698 ntBASIC5.05□□□□□ -1.6
SHC1P29353 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
SHC1P29353 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 OR2AT2P-201ENST00000413438 905 ntBASIC5.05□□□□□ -1.6
SHC1P29353 RPSAP35-201ENST00000413753 818 ntBASIC5.05□□□□□ -1.6
SHC1P29353 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.05□□□□□ -1.6
SHC1P29353 NAP1L4P2-201ENST00000425958 899 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AC013410.1-201ENST00000436223 1232 ntBASIC5.05□□□□□ -1.6
SHC1P29353 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.05□□□□□ -1.6
SHC1P29353 AL391987.1-201ENST00000441025 200 ntBASIC5.05□□□□□ -1.6
SHC1P29353 BTBD7P2-201ENST00000441962 620 ntBASIC5.05□□□□□ -1.6
SHC1P29353 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.05□□□□□ -1.6
SHC1P29353 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.05□□□□□ -1.6
SHC1P29353 NPM1P19-201ENST00000450070 712 ntBASIC5.05□□□□□ -1.6
SHC1P29353 VDAC2P4-201ENST00000452925 711 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AC016724.1-201ENST00000453215 421 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.05□□□□□ -1.6
SHC1P29353 SNORD125-201ENST00000459538 96 ntBASIC5.05□□□□□ -1.6
SHC1P29353 RWDD4P1-201ENST00000488019 565 ntBASIC5.05□□□□□ -1.6
SHC1P29353 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.05□□□□□ -1.6
SHC1P29353 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.05□□□□□ -1.6
SHC1P29353 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.05□□□□□ -1.6
SHC1P29353 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.05□□□□□ -1.6
SHC1P29353 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.05□□□□□ -1.6
SHC1P29353 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.05□□□□□ -1.6
SHC1P29353 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
SHC1P29353 HMGN2P47-201ENST00000559378 272 ntBASIC5.05□□□□□ -1.6
SHC1P29353 MRPS21P7-201ENST00000566937 238 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.05□□□□□ -1.6
SHC1P29353 SNORD95-201ENST00000579879 68 ntBASIC5.05□□□□□ -1.6
SHC1P29353 MIR4311-201ENST00000580794 100 ntBASIC5.05□□□□□ -1.6
SHC1P29353 MIR4505-201ENST00000582238 73 ntBASIC5.05□□□□□ -1.6
SHC1P29353 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.05□□□□□ -1.6
SHC1P29353 AC005520.3-201ENST00000602874 370 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AC025574.2-201ENST00000615621 514 ntBASIC5.05□□□□□ -1.6
SHC1P29353 CU639417.4-201ENST00000623928 207 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AC021766.1-201ENST00000624404 741 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AC008691.1-209ENST00000642094 814 ntBASIC5.05□□□□□ -1.6
SHC1P29353 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.05□□□□□ -1.6
SHC1P29353 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.05□□□□□ -1.6
SHC1P29353 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.05□□□□□ -1.6
SHC1P29353 AC005261.2-201ENST00000593427 4258 ntBASIC5.05□□□□□ -1.6
SHC1P29353 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHC1P29353 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHC1P29353 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.04□□□□□ -1.6
SHC1P29353 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.04□□□□□ -1.6
SHC1P29353 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.04□□□□□ -1.6
SHC1P29353 U3.28-201ENST00000391249 210 ntBASIC5.04□□□□□ -1.6
SHC1P29353 GABARAPL3-201ENST00000412799 354 ntBASIC5.04□□□□□ -1.6
SHC1P29353 AC017078.1-201ENST00000416146 368 ntBASIC5.04□□□□□ -1.6
SHC1P29353 AL133173.1-201ENST00000423458 397 ntBASIC5.04□□□□□ -1.6
SHC1P29353 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 AL136231.1-201ENST00000429407 730 ntBASIC5.04□□□□□ -1.6
SHC1P29353 CYCSP51-201ENST00000443545 318 ntBASIC5.04□□□□□ -1.6
SHC1P29353 AC073909.1-201ENST00000447112 999 ntBASIC5.04□□□□□ -1.6
SHC1P29353 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.04□□□□□ -1.6
SHC1P29353 AL450023.1-201ENST00000450868 751 ntBASIC5.04□□□□□ -1.6
SHC1P29353 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.04□□□□□ -1.6
SHC1P29353 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.04□□□□□ -1.6
SHC1P29353 RPS17P5-201ENST00000498293 408 ntBASIC5.04□□□□□ -1.6
SHC1P29353 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.04□□□□□ -1.6
SHC1P29353 RN7SKP253-201ENST00000516424 309 ntBASIC5.04□□□□□ -1.6
SHC1P29353 AL049872.1-201ENST00000556323 322 ntBASIC5.04□□□□□ -1.6
SHC1P29353 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.04□□□□□ -1.6
SHC1P29353 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.04□□□□□ -1.6
SHC1P29353 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.04□□□□□ -1.6
SHC1P29353 AC100814.1-201ENST00000606963 623 ntBASIC5.04□□□□□ -1.6
SHC1P29353 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.04□□□□□ -1.6
SHC1P29353 AC004477.3-201ENST00000614061 590 ntBASIC5.04□□□□□ -1.6
SHC1P29353 AC138627.1-204ENST00000641894 765 ntBASIC5.04□□□□□ -1.6
SHC1P29353 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms