Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
XRCC1P18887 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
XRCC1P18887 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.5□□□□□ -1.53
XRCC1P18887 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 OR9K1P-202ENST00000641111 3217 ntBASIC5.5□□□□□ -1.53
XRCC1P18887 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 CIR1P2-201ENST00000514821 1342 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 AC068870.3-201ENST00000625077 2536 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
XRCC1P18887 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
XRCC1P18887 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
XRCC1P18887 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.49□□□□□ -1.53
XRCC1P18887 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.49□□□□□ -1.53
XRCC1P18887 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.49□□□□□ -1.53
XRCC1P18887 RPS6P23-201ENST00000413224 722 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 RNF10P1-201ENST00000418589 369 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 MGAT2P2-201ENST00000427194 797 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.49□□□□□ -1.53
XRCC1P18887 AP000547.1-201ENST00000454360 617 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.49□□□□□ -1.53
XRCC1P18887 RPS26P24-201ENST00000497656 331 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.49□□□□□ -1.53
XRCC1P18887 DUTP7-201ENST00000507982 486 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.49□□□□□ -1.53
XRCC1P18887 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.49□□□□□ -1.53
XRCC1P18887 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.49□□□□□ -1.53
XRCC1P18887 AC138832.1-201ENST00000522871 556 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.49□□□□□ -1.53
XRCC1P18887 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.49□□□□□ -1.53
XRCC1P18887 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.49□□□□□ -1.53
XRCC1P18887 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.49□□□□□ -1.53
XRCC1P18887 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 MRPS21P7-201ENST00000566937 238 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 MIR4311-201ENST00000580794 100 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.49□□□□□ -1.53
XRCC1P18887 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.49□□□□□ -1.53
XRCC1P18887 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 CASC19-248ENST00000641674 1356 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.49□□□□□ -1.53
XRCC1P18887 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
XRCC1P18887 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.49□□□□□ -1.53
XRCC1P18887 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 AC092376.2-201ENST00000622621 4116 ntBASIC5.49□□□□□ -1.53
XRCC1P18887 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
XRCC1P18887 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
XRCC1P18887 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 HSPD1P7-201ENST00000447985 1686 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 RNU4-2-201ENST00000365668 141 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 U3.28-201ENST00000391249 210 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 AL391361.1-201ENST00000405580 489 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 AC096921.1-201ENST00000411661 375 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 HMGN2P27-201ENST00000427352 270 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.48□□□□□ -1.53
XRCC1P18887 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 AC012075.1-201ENST00000436549 580 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 AC006335.2-201ENST00000437993 330 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 AL390119.1-201ENST00000440329 312 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 LINC02210-201ENST00000444561 288 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 SNORD125-201ENST00000459538 96 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 RPS7P6-201ENST00000485777 579 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 EIF3LP3-201ENST00000495197 822 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 AC108693.1-201ENST00000496068 432 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 SCARNA21.2-201ENST00000516600 166 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 RNA5SP230-201ENST00000517039 122 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 IGKV2-18-201ENST00000522607 343 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms